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NA22606 DNA from LCL

Description:

EHLERS-DANLOS SYNDROME: TYPE IV; ARTERIAL, ECCHYMOTIC TYPE
COLLAGEN, TYPE III, ALPHA-1; COL3A1
NEUROFIBROMATOSIS, TYPE I; NF1

Affected:

Yes

Sex:

Female

Age:

44 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Hereditary Cancers
Quantity 25 µg
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source DNA from LCL
Family Member 2
Family History N
Relation to Proband sister
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected; also has neurofibromatosis type I; see GM22607 Fibroblast; midface hypoplasia; scarred TM right; dental crowding; micrognathia; small eyes; edema; soft skin; multiple neurofibromas; cigarette paper scarring; cafe-au-lait spots; scoliosis; kyphosis; hyperextension in shoulders, elbows, knees, and mildly in CMC joints and thumbs; pes planus; Beighton score 4/9; 3 to 5 tension migraines per week; problems hearing with background noise; pain in eyes; problems walking; constipation; slight narrowing in the supraclinoid cavernous portion of the right ICA; mild disc disease at C6-C7, posterior fossa arachnoid cyst inferiorly in C-spine; slight deformity in L1 vertebral body possibly due to previous trauma; mild disc buldge at L5-S1 with central annular tear; mild disc desiccation at L4-L5; minimal facet arthrosis at L4-S1; affected sister is GM22608; donor subject has a 1 bp deletion at nucleotide 766 of the COL3A1 gene [c.766delA]

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin confirmed by LINE assay
 
Gene COL3A1
Chromosomal Location 2q31
Allelic Variant 1 ; EHLERS-DANLOS SYNDROME, TYPE IV
Identified Mutation 766delA

Phenotypic Data

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Remarks Clinically affected; also has neurofibromatosis type I; see GM22607 Fibroblast; midface hypoplasia; scarred TM right; dental crowding; micrognathia; small eyes; edema; soft skin; multiple neurofibromas; cigarette paper scarring; cafe-au-lait spots; scoliosis; kyphosis; hyperextension in shoulders, elbows, knees, and mildly in CMC joints and thumbs; pes planus; Beighton score 4/9; 3 to 5 tension migraines per week; problems hearing with background noise; pain in eyes; problems walking; constipation; slight narrowing in the supraclinoid cavernous portion of the right ICA; mild disc disease at C6-C7, posterior fossa arachnoid cyst inferiorly in C-spine; slight deformity in L1 vertebral body possibly due to previous trauma; mild disc buldge at L5-S1 with central annular tear; mild disc desiccation at L4-L5; minimal facet arthrosis at L4-S1; affected sister is GM22608; donor subject has a 1 bp deletion at nucleotide 766 of the COL3A1 gene [c.766delA]

Publications

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Kellogg G, Thorsson B, Cai Y, Wisotzkey R, Pollock A, Akana M, Fox R, Jansen M, Gudmundsson EF, Patel B, Chang C, Jaremko M, Puig O, Gudnason V, Emilsson V, Molecular screening of familial hypercholesterolemia in Icelanders Scandinavian journal of clinical and laboratory investigation:1-7 2020
PubMed ID: 32706999

External Links

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Gene Cards COL3A1
Gene Ontology GO:0004857 enzyme inhibitor activity
GO:0005099 Ras GTPase activator activity
GO:0005201 extracellular matrix structural constituent
GO:0005581 collagen
GO:0005586 collagen type III
GO:0005737 cytoplasm
GO:0006817 phosphate transport
GO:0007265 Ras protein signal transduction
GO:0008015 circulation
GO:0008151 cell growth and/or maintenance
GO:0008285 negative regulation of cell proliferation
GO:0009887 organogenesis
GO:0045786 negative regulation of cell cycle
NCBI Gene Gene ID:1281
Gene ID:4763
NCBI GTR 120180 COLLAGEN, TYPE III, ALPHA-1; COL3A1
130050 EHLERS-DANLOS SYNDROME, VASCULAR TYPE; EDSVASC
162200 NEUROFIBROMATOSIS, TYPE I; NF1
OMIM 120180 COLLAGEN, TYPE III, ALPHA-1; COL3A1
130050 EHLERS-DANLOS SYNDROME, VASCULAR TYPE; EDSVASC
162200 NEUROFIBROMATOSIS, TYPE I; NF1
Omim Description EDS IV
  EDS4
  EHLERS-DANLOS SYNDROME, ARTERIAL TYPE
  EHLERS-DANLOS SYNDROME, ECCHYMOTIC TYPE
  EHLERS-DANLOS SYNDROME, SACK-BARABAS TYPE
  EHLERS-DANLOS SYNDROME, TYPE IV, AUTOSOMAL DOMINANT
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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How to Order
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