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NA11576 DNA from Amniotic fluid-derived cell line

Description:

HOLOCARBOXYLASE SYNTHETASE DEFICIENCY
HOLOCARBOXYLASE SYNTHETASE; HLCS

Affected:

Yes

Sex:

Female

Age:

16 FW (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Quantity 10 µg
Quantitation Method Please see our FAQ
Biopsy Source Amniotic fluid
Cell Type Amniotic fluid-derived cell line
Transformant Untransformed
Sample Source DNA from Amniotic fluid-derived cell line
Race White
Ethnicity GERMAN
Relation to Proband proband
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks Amniocytes have <1% of control holocarboxylase synthetase activity; pyruvate carboxylase, propionyl CoA carboxylase, & 3-methylcrotonyl CoA carboxylase enzyme activities were also very low; 2 affected sibs; slow growing culture; donor subject is a compound heterozygote: one allele has a IVS10+5G>A mutation in the HCLS gene and a second allele has a proline for leucine substitution at codon 514 [Leu514Pro (L514P)]

Characterizations

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Passage Frozen 7
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis
 
biotin--[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase According to the submitter, biochemical test results for this subject showed decreased enzyme activity. EC Number: 6.3.4.10; <1% activity.
 
Gene HLCS
Chromosomal Location 21q22.1
Allelic Variant 1 253270.0007; HOLOCARBOXYLASE SYNTHETASE DEFICIENCY
Identified Mutation IVS10+5G>A; In a large survey of HLCS mutations in patients with biotin-responsive MCD (253270), Yang et al. (Hum Genet 109:526-534,2001) identified an IVS10+5G-A mutation in 6 patients: 2 patients from the Faroe Islands and a Spanish and a Danish patient were homozygous for the mutation; and a French and a German patient were heterozygous. The haplotype of the HLCS gene in all 6 patients was identical, suggesting a founder mutation.
 
Gene HLCS
Chromosomal Location 21q22.1
Allelic Variant 2 L514P; HOLOCARBOXYLASE SYNTHETASE DEFICIENCY
Identified Mutation LEU514PRO

Phenotypic Data

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Remarks Amniocytes have <1% of control holocarboxylase synthetase activity; pyruvate carboxylase, propionyl CoA carboxylase, & 3-methylcrotonyl CoA carboxylase enzyme activities were also very low; 2 affected sibs; slow growing culture; donor subject is a compound heterozygote: one allele has a IVS10+5G>A mutation in the HCLS gene and a second allele has a proline for leucine substitution at codon 514 [Leu514Pro (L514P)]

External Links

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Gene Cards HLCS
Gene Ontology GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
GO:0004078 biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity
GO:0004079 biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity
GO:0004080 biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity
GO:0006464 protein modification
GO:0016874 ligase activity
NCBI Gene Gene ID:3141
NCBI GTR 253270 HOLOCARBOXYLASE SYNTHETASE DEFICIENCY
609018 HOLOCARBOXYLASE SYNTHETASE; HLCS
OMIM 253270 HOLOCARBOXYLASE SYNTHETASE DEFICIENCY
609018 HOLOCARBOXYLASE SYNTHETASE; HLCS
Omim Description HLCS DEFICIENCY
  HOLOCARBOXYLASE SYNTHETASE DEFICIENCY
  MULTIPLE CARBOXYLASE DEFICIENCY, BIOTIN-RESPONSIVE; MCD
  MULTIPLE CARBOXYLASE DEFICIENCY, NEONATAL FORMHOLOCARBOXYLASE SYNTHETASE; HLCS, INCLUDED
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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  • GM11576 - Amniotic fluid-derived cell line
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