Description:
                                                    
                                                    
                                                         
                                                            
                                                            MUCOLIPIDOSIS IIIA 
                                                            
                                                            N-ACETYLGLUCOSAMINE-1-PHOSPHOTRANSFERASE, ALPHA/BETA SUBUNITS; GNPTAB 
                                                            
                                                    
                                                 
                                                
                                                
                                                
                                                
                                             
                                         
                                     
                                    
                                        
                                            
                                            
                                            
                                            
                                                
                                                    
                                                        
                                                            
                                                            
                                                                
                                                                    
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                                                                            Repository
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                                                                            NIGMS Human Genetic Cell Repository
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	| Subcollection | 
	Heritable Diseases Lysosomal Storage Diseases | 
 
                                                                
                                                                
                                                                
	| Class | 
	Disorders of Carbohydrate Metabolism | 
 
                                                                
                                                                
                                                                
                                                                
                                                                
                                                                    
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                                                                            Cell Type
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                                                                            Fibroblast
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                                                                            Transformant
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                                                                            Untransformed
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                                                                            Race
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                                                                            Black/African American
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                                                                            Family Member
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                                                                            1
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                                                                            Relation to Proband
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                                                                            proband
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                                                                            Confirmation
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                                                                            Clinical summary/Case history
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                                                                            Species
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                                                                            Homo sapiens
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                                                                            Common Name
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                                                                            Human
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                                                                            Remarks
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	| Passage Frozen | 
	2 | 
 
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	| UDP-N-acetylglucosamine--lysosomal-enzyme N-acetylglucosaminephosphotransferase | 
	According to the submitter, biochemical test results for this subject showed decreased enzyme activity. EC Number: 2.7.8.17 | 
 
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	| Gene | 
	GNPTAB | 
 
	| Chromosomal Location | 
	12q23.3 | 
 
	| Allelic Variant 1 | 
	Q278X; MUCOLIPIDOSIS IIIA | 
 
	| Identified Mutation | 
	GLN278TER | 
 
	|   | 
 
	| Gene | 
	GNPTAB | 
 
	| Chromosomal Location | 
	12q23.3 | 
 
	| Allelic Variant 2 | 
	607840.0013; MUCOLIPIDOSIS IIIA | 
 
	| Identified Mutation | 
	IVS17DS,T>G,+6; In a family with 2 affected sibs and in 2 patients with mucolipidosis IIIA (252900), Kudo et al. (Am J Hum Genet 78:451-463, 2006) described a donor splice site mutation in intron 17 of the GNPTAB gene, IVS17+6T-G, that results in skipping of exon 17 and frameshift with a premature termination at residue 1085 (P1084fsX1172). This same result was observed in another intron 17 splice site mutation in a patient with ML II (607840.0012). The former intron 17 splice site mutation was designated type I and the latter type II. Although the mRNA sequences derived from these 2 mutations are the same, the GlcNAc-phosphotransferase activities and clinical outcomes are different; fibroblasts with the type I mutation exhibited less than 0.1% activity, whereas those carrying the type II mutation exhibited 1 to 3% GlcNAc-phosphotransferase activity. That the type II mutation was located outside the invariant splice site was suggested as a possible cause of the greater activity. | 
 
                                                                
                                                                
                                                                
                                                                
                                                                
                                                                
                                                             
                                                         
                                                     
                                                 
                                                
                                                    
                                                        
                                                            
                                                            
                                                            
                                                                
	| Remarks | 
	Similarly affected sib; deficient fibroblast B-hexosaminidase, B-galactosidase, A-fucosidase, A-galactosidase, A-mannosidase, and N-acetylglucosaminylphosphotransferase activity; complementation group A; GlcNAc-Phosphotransferase activity = 3% (measured as specific activity in cell lysate and reported as percentage of activity in normal fibroblasts); donor subject is a compound heterozygote: one allele has a C>T transition at nucleotide 996 in exon 8 of the GNPTAB gene [996C>T] resulting in a substitution of a stop codon for glutamine at codon 278 [Gln278Ter (Q278X)] and a second allele has a donor splice site mutation in intron 17 of the GNPTAB gene [IVS17+6T>G] resulting in the skipping of exon 17 and a frameshift with a premature termination at residue 1085 [P1084fsX1085]. | 
 
                                                                
                                                             
                                                            
                                                            
                                                         
                                                     
                                                 
                                                
                                                    
                                                        
                                                            
                                                            
                                                            
                                                                
	| Kudo M, Brem MS, Canfield WM, Mucolipidosis II (I-Cell Disease) and Mucolipidosis IIIA (Classical Pseudo-Hurler Polydystrophy) Are Caused by Mutations in the GlcNAc-Phosphotransferase alpha / beta -Subunits Precursor Gene. Am J Hum Genet78(3):451-63 2006 | 
 
	| PubMed ID: 16465621 | 
 
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	| Little LE, Mueller OT, Honey NK, Shows TB, Miller AL, Heterogeneity of N-acetylglucosamine 1-phosphotransferase within mucolipidosis III. J Biol Chem261:733-8 1986 | 
 
	| PubMed ID: 3001079 | 
 
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	| Honey NK, Mueller OT, Little LE, Miller AL, Shows TB, Mucolipidosis III is genetically heterogeneous. Proc Natl Acad Sci U S A79:7420-4 1982 | 
 
	| PubMed ID: 6961420 | 
 
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	| Robey PG, Neufeld EF, Defective phosphorylation and processing of beta-hexosaminidase by intact cultured fibroblasts from patients with mucolipidosis III. Arch Biochem Biophys213:251-7 1982 | 
 
	| PubMed ID: 6460470 | 
 
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	| Varki A, Reitman ML, Vannier A, Kornfeld S, Grubb JH, Sly WS, Demonstration of the heterozygous state for I-cell disease and pseudo- Hurler polydystrophy by assay of N-acetylglucosaminylphosphotransferase in white blood cells and fibroblasts. Am J Hum Genet34:717-29 1982 | 
 
	| PubMed ID: 6289658 | 
 
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	| Andria G, Sly WS, Intermediate golgi alpha-D-mannosidosis and mucolipidosis II and III. Pediatr Res15:70-3 1981 | 
 
	| PubMed ID: 7208171 | 
 
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	| Reitman ML, Varki A, Kornfeld S, Fibroblasts from patients with I-cell disease and pseudo-Hurler polydystrophy are deficient in uridine 5'-diphosphate-N- acetylglucosamine: glycoprotein N-acetylglucosaminylphosphotransferase activity. J Clin Invest67:1574-9 1981 | 
 
	| PubMed ID: 6262380 | 
 
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	| Varki AP, Reitman ML, Kornfeld S, Identification of a variant of mucolipidosis III (pseudo-Hurler polydystrophy): a catalytically active N- acetylglucosaminylphosphotransferase that fails to phosphorylate lysosomal enzymes. Proc Natl Acad Sci U S A78:7773-7 1981 | 
 
	| PubMed ID: 6461005 | 
 
                                                                
                                                             
                                                            
                                                         
                                                     
                                                 
                                                
                                                
                                                
                                                    
                                                        
                                                            
                                                            
                                                                
	| Passage Frozen | 
	2 | 
 
	| Split Ratio | 
	1:5 | 
 
	| Temperature | 
	37 C | 
 
	| Percent CO2 | 
	5% | 
 
	| Medium | 
	Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent | 
 
	| Serum | 
	15% fetal bovine serum Not inactivated           | 
 
	| Substrate | 
	None specified | 
 
	| Subcultivation Method | 
	trypsin-EDTA | 
 
	| Supplement | 
	- | 
 
                                                                
                                                                
                                                             
                                                         
                                                     
                                                 
                                             
                                         
                                     
                                 
                                
                             
                         
                     
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