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NA50114 DNA from LCL

Description:

DUPLICATED CHROMOSOME
COPY NUMBER VARIATION (CNV) REFERENCE PANEL 02

Affected:

No Data

Sex:

Male

Age:

9 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
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  • Images

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Chromosome Abnormalities
dbGaP
Quantity 25 µg
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source DNA from LCL
Family History N
Relation to Proband proband
Confirmation Karyotypic analysis after cell line submission to CCR
ISCN 46,XY,dup(18)(q12.2q21).ish dup(18)(q12.2q21)(wcp18+).arr 18q12.2q21.32(34757108-56178804)x3
Species Homo sapiens
Common Name Human
Remarks Developed a severe seizure disorder at age 5 months which persists; left cryptorchidism; biotin deficiency; defect in the enzyme dihydropteridine reductase, resulting in higher-than normal levels of biopterin; profound mental retardation; develpomental level at age 9 years is less than 6 months of age; failure to thrive; growth retardation; down-slanting palpebral fissures; epicanthal folds; an alternating esotropia; short nose; open-mouth habitus; high palate; hyperextensible joints; hypoplastic nails; severely hypotonic with decreased reflexes; ventricular septal defect; prominent calcaneus/club foot

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin confirmed by LINE assay
 
Cytogenetics Chromosome 18: DUPLICATION Aneuploid Segment (+)18q12>18q21

Phenotypic Data

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Remarks Developed a severe seizure disorder at age 5 months which persists; left cryptorchidism; biotin deficiency; defect in the enzyme dihydropteridine reductase, resulting in higher-than normal levels of biopterin; profound mental retardation; develpomental level at age 9 years is less than 6 months of age; failure to thrive; growth retardation; down-slanting palpebral fissures; epicanthal folds; an alternating esotropia; short nose; open-mouth habitus; high palate; hyperextensible joints; hypoplastic nails; severely hypotonic with decreased reflexes; ventricular septal defect; prominent calcaneus/club foot

Publications

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Tang Z, Berlin DS, Toji L, Toruner GA, Beiswanger C, Kulkarni S, Martin CL, Emanuel BS, Christman M, Gerry NP, A dynamic database of microarray-characterized cell lines with various cytogenetic and genomic backgrounds G3 (Bethesda, Md)3:1143-9 2013
PubMed ID: 23665875
 
Mewar R, Kline AD, Harrison W, Rojas K, Greenberg F, Overhauser J, Clinical and molecular evaluation of four patients with partial duplications of the long arm of chromosome 18. Am J Hum Genet53(6):1269-78 1993
PubMed ID: 8250043

Images

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View FISH Whole chromosome 18 painting probe in green, FITC
FISH Whole chromosome 18 painting probe in green, FITC
karyotype Whole chromosome 18 painting probe in green, FITC
karyotype Whole chromosome 18 painting probe in green, FITC
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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  • GM50114 - B-Lymphocyte
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