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GM28472 Fibroblast from Skin, Skin

Description:

MITOCHONDRIAL SHORT-CHAIN ENOYL-COA HYDRATASE 1 DEFICIENCY; ECHS1D
ENOYL-COA HYDRATASE, SHORT-CHAIN, 1, MITOCHONDRIAL; ECHS1

Affected:

Yes

Sex:

Female

Age:

3 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Skin
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Skin
Race White
Subject Type trio
Ethnicity Syrian Jew
Country of Origin MEXICO
Family Member 1
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected; global developmental delay, abnormalities of the brain, dystonia, central hypotonia; homozygous mutation in the ECHS1 gene c.673T>C (p.Cys225Arg). Karyotype 46,XX.arr(1-22,X)x2; see "Phenotypic Data Tab"; unaffected carrier mother is GM28473 (fibro) and unaffected carrier father is GM28474 (fibro).

Characterizations

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PDL at Freeze 7.45
Passage Frozen 2
 
Gene ECHS1
Chromosomal Location 10q26.3
Allelic Variant 1 ; Mitochondrial short-chain enoyl-CoA hydratase 1 deficiency
Identified Mutation c.673T (p.Cys225Arg)
 
Gene ECHS1
Chromosomal Location 10q26.3
Allelic Variant 2 ; Mitochondrial short-chain enoyl-CoA hydratase 1 deficiency
Identified Mutation c.673T (p.Cys225Arg)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 3 YR
Sex Female
Age of Onset(If not a control) 9 MO
Age at Diagnosis(If not a control) 15 MO
Racial Category White
Country MEXICO
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  ECHS1, C.673T>C, P.CYS225ARG, WHOLE-EXOME SEQUENCING
Other variants:  G6PD DEFICIENCY ANEMIA TRAIT (NEWBORN SCREEN)
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  9 MONTHS
Age at Diagnosis:  15 MONTHS
In Utero History Information
Additional Information:  UNCOMPLICATED PREGNANCY
Birth History Information
Positive newborn screen
Caesarian section
Dysmorphic Features
Neurological Symptoms
Dystonia
Hypotonia
White matter issues
Basal ganglia damage
Additional Information:  TONE REDUCED AXIALLY AND INCREASED IN LEGS DYSTONIC POSTURING OF FEET
Optical and Audiological Symptoms
Additional Information:  POOR VISUAL FIXATION ROVING EYE MOVEMENTS, POOR FIX AND FOLLOW SUSPECTED CEREBRAL VISUAL IMPAIRMENT
Musculoskeletal Symptoms
Additional Information:  SIX LEG FRACTURES MUSCLE SPASMS
Developmental Milestones
Delayed speech and language development
Global developmental delay
Abnormal height for age
Holding Head Up Without Assistance:  Achieved but not maintained
Sitting Without Assistance:  Not achieved and not maintained
Walking Without Assistance:  Not achieved and not maintained
Running:  Not achieved and not maintained
Additional Information:  GLOBAL DEVELOPMENTAL REGRESSION AT 10 MONTHS: LOST ALL MOTOR ABILITIES SHORT STATUS
Gastrointestinal Symptoms
Gastrointestinal reflux
Eating difficulties
Additional Information:  GASTROPARESIS RECURRENT VOMITING SWALLOWING CONCERNS TWO EPISODES OF SEVERE METABOLIC ACIDOSIS
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Cognitive and Behavioral Symptoms
Sleep disturbances
Additional Information:  IRRITABILITY
Additional Information
Uncategorized Symptoms:  LETHARGY ANEMIA, IRON DEFICIENCY PAST CRY EPISODES
Testing Performed
Neurological Testing:  BRAIN MRI AT 10 MONTHS: T2 SIGNAL ABNORMALITY AND DIFFUSION ABNORMALITIES IN THE GLOBUS PALLIDUS, STRIATUM AND SUBSTANTIA NIGRA, LEIGH-LIKE CHANGES IN BASAL GANGLIA
Metabolic, Hematologic, and Endocrinologic Testing:  METABOLIC ACIDOSIS PLASMA ALANINE LEVEL NORMALIZED AFTER LOW VALINE DIET + KETONEX-1 VALINE: 77 (L) ORNITHINE: 92 (H) CO2: 18 (L) ANION GAP: 22 (H) CALCIUM: 10.6 (H) PHOSPHORUS: 5.8 (H) CK: 212 (H) TAURINE: 101 (H) ASPARTIC ACID: 12 (H) GLUTAMIC ACID: 102 (H) ALANINE: 735 (H)
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Wheelchair or ambulation devices
Surgeries  G-TUBE PLACED PYLOROPLASTY NISSEN FUNDOPLICATION
Additional Testing:  ANAT BANIEL METHOD FOR NEUROMOVEMENT
Medications
 BIOTIN 100 MG/DAY COQ10 70 MG/DAY VITAMIN E 400 IU/DAY DHA 2.5 ML/DAY LEVOCARNITINE IRON VITAMIN D NAC 261 MG Q8H PREVIOUSLY TRIED RIBOFLAVIN - CAUSED NAUSEA LOW VALINE DIET SUPPLEMENTED WITH KETONEX-1 CLONAZEPAM NEXIUM
Family History
 DISTANT CONSANGUINITY
Remarks Clinically affected; global developmental delay, abnormalities of the brain, dystonia, central hypotonia; homozygous mutation in the ECHS1 gene c.673T>C (p.Cys225Arg). Karyotype 46,XX.arr(1-22,X)x2; see "Phenotypic Data Tab"; unaffected carrier mother is GM28473 (fibro) and unaffected carrier father is GM28474 (fibro).

External Links

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Gene Cards ECHS1
Gene Ontology GO:0004300 enoyl-CoA hydratase activity
GO:0005739 mitochondrion
GO:0006091 energy pathways
GO:0006631 fatty acid metabolism
GO:0006635 fatty acid beta-oxidation
GO:0016829 lyase activity
NCBI Gene Gene ID:1892
NCBI GTR 602292 ENOYL-CoA HYDRATASE, SHORT-CHAIN, 1, MITOCHONDRIAL; ECHS1
616277 MITOCHONDRIAL SHORT-CHAIN ENOYL-CoA HYDRATASE 1 DEFICIENCY; ECHS1D
OMIM 602292 ENOYL-CoA HYDRATASE, SHORT-CHAIN, 1, MITOCHONDRIAL; ECHS1
616277 MITOCHONDRIAL SHORT-CHAIN ENOYL-CoA HYDRATASE 1 DEFICIENCY; ECHS1D

Culture Protocols

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Cumulative PDL at Freeze 7.45
Passage Frozen 2
Split Ratio 1:8
Temperature 37 C
Percent CO2 5%
Percent O2 3%
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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