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GM28318 LCL from B-Lymphocyte

Description:

ZINC FINGER- AND BTB DOMAIN-CONTAINING PROTEIN 47; ZBTB47

Affected:

Yes

Sex:

Male

Age:

7 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Ethnicity Hispanic/Latino
Country of Origin USA
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected. Seizure disorder (epilepsy); global developmental delays; behavior disorder including autism; Chiari malformation. Symptom began in 17 months with epilepsy lead to stopped breath. For more information see "Phenotic Data" tab. A de nov

Characterizations

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Gene ZBTB47
Chromosomal Location 3p22.1
Allelic Variant 1 ; ZINC FINGER- AND BTB DOMAIN-CONTAINING PROTEIN 47; ZBTB47
Identified Mutation c.1429G>A (p.E477K)
 
Gene PPOX
Chromosomal Location 1q23.3
Allelic Variant 1 ; VARIEGATE PORPHYRIA; VP
Identified Mutation c.338+2dupT

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 7 YR
Sex Male
Age of Onset(If not a control) 17 MO
Age at Diagnosis(If not a control) 5 YR
Hispanic or Latino/Not Hispanic or Latino Hispanic/Latino
Racial Category White
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  ZBTB47, C.1429G>A (P.E477K), MISSENSE
Zygosity:  Heterozygous
Other variants:  PPOX, C.338+2DUPT, ABERRANT SPLICING, HETEROZYGOUS
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  17 MONTHS
Age at Diagnosis:  5 YEARS
In Utero History Information
Birth History Information
Dysmorphic Features
Hypertelorism
Additional Information:  LEG LENGTH DISCREPANCY
Neurological Symptoms
Seizures
Structural brain anomaly
Sleep abnormalities
Unstable gait
White matter issues
Additional Information:  TREMOR
Optical and Audiological Symptoms
Defective hearing
Musculoskeletal Symptoms
Additional Information:  JOINT LAXITY
Developmental Milestones
Delayed speech and language development
Global developmental delay
Delayed fine motor skills
Gastrointestinal Symptoms
Constipation
Additional Information:  FREQUENT GI INFECTIONS FREQUENT ABDOMINAL PAIN
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Heart murmur
Additional Information:  AORTIC VALVE ANOMALY TWO EPISODES OF RESPIRATORY FAILURE STRIDOR
Cognitive and Behavioral Symptoms
Mood disorder
Behavioral problems
Autism spectrum disorder
Sensory processing disorder
Aggression
Sleep disturbances
Additional Information:  ABNORMAL SPEECH DOES NOT UNDERSTAND SPEECH OBSESSIVE-COMPULSIVE DISORDER LIKE BEHAVIOR NOT POTTY TRAINED
Additional Information
Uncategorized Symptoms:  LOW BODY TEMPERATURE LOW BLOOD PRESSURE SIGNS OF PURBERTY (BODY ODOR)
Testing Performed
Neurological Testing:  BRAIN MRI: CHIARI I MALFORMATION (CORTICAL DYSPLASIA OF LEFT TEMPORAL LOBE); HAZINESS OF GREY-WHITE MATTER INTERFACE TEMPORAL POLES, ESPECIALLY L TEMPORAL LOBE; MILD ASYMMETRIC HIGH DENSITY IN LEFT INSULA. PET: DECREASED GLUCOSE METABOLISM IN TEMPORAL LOBES AND LEFT FRONTAL LOBE. EEG: INDEPENDENT LEFT AND RIGHT PARIETAL EPILEPTIFORM DISCAHRGES
Cognitive and Behavioral Testing:  PSYCHOLOGICAL TESTING: SIGNIFICANT BEHAVIORAL DYSREGULATION; MODERATE INTELLECTUAL DISABILITY; CONSIDERABLE LANGUAGE AND COMMUNICATION IMPAIRMENT; FINE MOTOR DIFFICULTIES
Metabolic, Hematologic, and Endocrinologic Testing:  METABOLIC TESTING: LACTIC ACID LOW; 2-HYDROXYLGLUTARIC ACID AND ACETOACETIC ACID 2-TIMES THAN NORMAL
Uncategorized Testing:  LIGHT SENSITIVITY
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Surgeries  ADENOIDECTOMY TONSILLECTOMY PE TUBE INSERTION
Medications
 SEIZURE MEDICINES INEFFECTIVE AND DISCONTINUED
Family History
 THREE SISTERS HAVE CHIARI MALFORMATION.
Remarks Clinically affected. Seizure disorder (epilepsy); global developmental delays; behavior disorder including autism; Chiari malformation. Symptom began in 17 months with epilepsy lead to stopped breath. For more information see "Phenotic Data" tab. A de nov

External Links

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NCBI GTR 619969 ZINC FINGER- AND BTB DOMAIN-CONTAINING PROTEIN 47; ZBTB47
OMIM 619969 ZINC FINGER- AND BTB DOMAIN-CONTAINING PROTEIN 47; ZBTB47

Culture Protocols

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Split Ratio 1:6
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 20% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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