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GM28225 LCL from B-Lymphocyte

Description:

GAND SYNDROME; GAND
GATA ZINC FINGER DOMAIN-CONTAINING PROTEIN 2B; GATAD2B

Affected:

Yes

Sex:

Male

Age:

2 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Ethnicity Not Hispanic/Latino
Country of Origin USA
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected. Mild developmental delay, macrocephaly with mild dysmorphic features. Moderate motor delays. Apraxia. Only turned to one side at 2 months. Roll over at 8 months. Walking with a wide gait. Severely speech delay. White matter disease. M

Characterizations

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Gene GATAD2B
Chromosomal Location 1q21.3
Allelic Variant 1 p.Ser135ArgfsX17; GAND SYNDROME; GAND
Identified Mutation c.405_406delTCinsG (p.Ser135ArgfsX17)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 2 YR
Sex Male
Age of Onset(If not a control) 2 MO
Age at Diagnosis(If not a control) 2 YR
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category White
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  CLINICAL EXOME SEQUENCE ANALYSIS REVEALED AN AUTOSOMAL DOMINANT DE NOVO PATHOGENIC VARIANT IN EXON 3 OF THE GATAD2B GENE: C.405_406DELTCINSG (P.S135RFSX17)
Zygosity:  Heterozygous
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  2 MONTHS
Age at Diagnosis:  2 YEARS; DIAGNOSED BY A GENETICIST
In Utero History Information
Additional Information:  C-SECTION DELIVERY AT 39 WEEKS; MOTHER HAD LOW PLATELETS AND RECEIVED TRANSFUSION
Birth History Information
Additional Information:  LARGE HEAD AT BIRTH ON
Dysmorphic Features
Macrocephaly
Additional Information:  MILD DYSMORPHIC FACIAL FEATURES; ASYMMETRIC SKULL (MILD); PROMINENT FOREHEAD; BORDERLINE HYPERTELORIS WITH EXCESS MOVEMENT; DEPRESSED NASAL ROOT; MICROGNATHIA
Neurological Symptoms
Dystonia
Hypotonia
Unstable gait
White matter issues
Additional Information:  RESPONDING TO PHYSICAL THERAPY TO TREAT TORTICOLLIS (CERVICAL DYSTONIA)
Optical and Audiological Symptoms
Defective vision
Additional Information:  SUCCESSFUL EYE SURGERY FOR ESOTROPIA - VISION IMPROVED
Musculoskeletal Symptoms
Additional Information:  JOINT LAXITY; "CEREBRAL PALSY" TIGHT IN HANDS WHEN CLENCHING FINGERS; SOMETIMES DIFFICULT TO OPEN FINGERS; PROXIMAL WEAKNESS.
Developmental Milestones
Delayed speech and language development
Global developmental delay
Abnormal height for age
Abnormal weight for age
Additional Information:  SEVERELY SPEECH DELAYED; MOTOR DELAY; APRAXIA; CAN SIT, CRAWL, PULL UP, AND CRUISE ON FURNTURE; WALKS WITH A WADDLING OR WIDE BASE GAIT; DOES NOT CLAP OR POINT.
Gastrointestinal Symptoms
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Heart murmur
Additional Information:  BICUSPID AORTIC VALVE
Cognitive and Behavioral Symptoms
Additional Information:  WHITE MATTER DISEASE; HAPPY PERSONALITY; INTERACTIVE; SHOWS GOOD EYE CONTACT; USES HANDS TO GRAB ATTENTION; IS EATING AND SLEEPING WELL; SOCIAL.
Additional Information
Testing Performed
Neurological Testing:  ASSESSED AT 8.5 MONTHS AND DID NOT ROLL OVER OR SIT; HAD POOR EYE CONTACT; ONLY TURNED TO ONE SIDE AT 2 MONTHS OF AGE; BRAIN MRI SHOWED MODERATE INCREASED SUBARACHNOID FLUID SURROUNDING BOTH CEREBRAL CONVEXITIES, DECREASED T1, INCREASED T2 SIGNAL, SMALL AREA OF GLIOSIS VERSUS HYPOMYELINATION IN RIGHT POSTERIOR PERIVENTRICULAR WHITE MATTER.
Musculoskeletal and Developmental Testing:  BASED ON CDC BOYS 2-20 YEARS, 96%ILE FOR WEIGHT, >99%ILE FOR HEIGHT, >99%ILE FOR HEAD CIRCUMFERENCE, BMI 15.5
Respiratory and Cardiovascular Testing:  CARDIAC ECHO: BICUSPID AORTIC VALVE
Uncategorized Testing:  NORMAL MICROARRAY GENETIC TEST
Treatments and Assistive Devices
Physical therapy
Surgeries  EYE SURGERY
Medications
Family History
 BOTH PARENTS (NOT IN REPOSITORY) TESTED NEGATIVE FOR THE VARIANT IN GATAD2B; PARENTS HAVE MILDLY LARGE HEADS; MOST LIKELY THE VARIANT IS DE NOVO IN THE AFFECTED CHILD THOUGH THE POSSIBILITY OF GERMLINE MOSAICISM CANNOT BE RULED OUT; MOTHER'S MATERNAL COUSIN HAS LEGG-PERTHES; MOTHER HAS A NORMAL HALF SISTER; PATERNAL GRANDFATHER HAD A HEART ATTACK BUT IS ALIVE; NO FAMILY HISTORY OF BIRTH DEFECTS, GENETIC DISORDERS, DEVELOPMENTAL DISORDERS, OR DEVELOPMENTAL DELAY; PARENTS ARE NOT RELATED.
Remarks Clinically affected. Mild developmental delay, macrocephaly with mild dysmorphic features. Moderate motor delays. Apraxia. Only turned to one side at 2 months. Roll over at 8 months. Walking with a wide gait. Severely speech delay. White matter disease. M

External Links

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Gene Cards GATAD2B
NCBI GTR 614998 GATA ZINC FINGER DOMAIN-CONTAINING PROTEIN 2B; GATAD2B
615074 GAND SYNDROME; GAND
OMIM 614998 GATA ZINC FINGER DOMAIN-CONTAINING PROTEIN 2B; GATAD2B
615074 GAND SYNDROME; GAND

Culture Protocols

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Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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