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GM27686 LCL from B-Lymphocyte

Description:

GLUT1 DEFICIENCY SYNDROME 1; GLUT1DS1
SOLUTE CARRIER FAMILY 2 (FACILITATED GLUCOSE TRANSPORTER), MEMBER 1; SLC2A1

Affected:

Yes

Sex:

Female

Age:

15 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Subject Type parent/child concordant pair
Ethnicity Not Hispanic/Latino
Ethnicity Jewish Ashkenazi
Country of Origin ISRAEL
Family Member 1
Family History Y
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected. Patient 1 in the publication (PMID: 23340081). See the 'Phenotypic Data" tab. Heterozygous mutation in the SLC2A1 gene: R218H and R458W in the same allele. Clinically affected mother is GM27687 (LCL).

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by LINE assay
 
Gene SLC2A1
Chromosomal Location 1p34.2
Allelic Variant 1 ; GLUT1 DEFICIENCY SYNDROME 1; GLUT1DS1
Identified Mutation c.653G>A (p.Arg218His); Conflicting interpretations of pathogenicity​
 
Gene SLC2A1
Chromosomal Location 1p34.2
Allelic Variant 1 138140.0021; GLUT1 DEFICIENCY SYNDROME 1; GLUT1DS1
Identified Mutation c.1372C>T (p.Arg458Trp); In a 30-year-old man with idiopathic generalized epilepsy (EIG12; 614847), Arsov et al. (2012) identified a heterozygous c.1372C-T transition in exon 10 of the SLC2A1 gene, resulting in an arg458-to-trp (R458W) substitution at a highly conserved residue. In vitro functional expression studies in Xenopus oocytes showed that the R458W substitution caused a marked reduced in glucose transport. The patient had onset of childhood absence epilepsy at age 6 and developed paroyxsmal exertional dyskinesia in his teens. He also had arm dystonia. The patient's father, who also carried the mutation, had onset of childhood absence seizures at age 7, developed PED as an adult, and had disabling leg dyskinesia when walking. The father's unaffected 66-year-old sister also carried the mutation, indicating incomplete penetrance. The proband was identified from a cohort of 504 probands with IGE who underwent direct sequencing of the SLC2A1 gene. The mutation was not found in 470 controls and had not previously been reported in databases of normal human genetic variation.

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 15 YR
Sex Female
Age of Onset(If not a control) 2 YR
Age at Diagnosis(If not a control) 4 YR
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category White
Country ISRAEL
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  SLC2A1, R218H, MISSENSE, EXON 5
Zygosity:  Heterozygous
Other variants:  SLC2A1, R458W, MISSENSE, EXON 10
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  1.5 TO 2 YEARS
Age at Diagnosis:  4 YEARS AND 10 MONTHS
In Utero History Information
Birth History Information
Dysmorphic Features
Neurological Symptoms
Seizures
Sleep abnormalities
Additional Information:  HEADACHE
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Developmental Milestones
Gastrointestinal Symptoms
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Cognitive and Behavioral Symptoms
Attention deficit hyperactivity disorder
Additional Information:  MONOTONICALLY SLOW TROUBLE AT CUTTING AND DRAWING IN THE LINES BEFORE DIET SLOW COPYING FROM THE BOARD
Additional Information
Testing Performed
Neurological Testing:  EEG: FAST PSW PROMINENT IN SLEEP
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Additional Testing:  PSYCHOLOGICAL THERAPY
Medications
 MODIFIED ATKINS KETOGENIC DIET MCT OIL CALCIUM WITH MAGNESIUM RISPERDAL MULTI-VITAMINS
Family History
 3 GENERATIONS OF 10 CASES IN TOTAL (SEE PMID: 23340081) FOR THE PEDIGREE TREE GRANDFATHER, MOTHER, 2 SIBLINGS, 5 UNCLES/AUNTS
Remarks Clinically affected. Patient 1 in the publication (PMID: 23340081). See the 'Phenotypic Data" tab. Heterozygous mutation in the SLC2A1 gene: R218H and R458W in the same allele. Clinically affected mother is GM27687 (LCL).

Publications

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Tzadok M, Nissenkorn A, Porper K, Matot I, Marcu S, Anikster Y, Menascu S, Bercovich D, Ben Zeev B, The many faces of Glut1 deficiency syndrome Journal of child neurology29:349-59 2013
PubMed ID: 23340081

External Links

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Gene Cards SLC2A1
Gene Ontology GO:0005215 transporter activity
GO:0005351 sugar porter activity
GO:0005355 glucose transporter activity
GO:0005624 membrane fraction
GO:0008643 carbohydrate transport
GO:0015758 glucose transport
GO:0016021 integral to membrane
NCBI Gene Gene ID:6513
NCBI GTR 138140 SOLUTE CARRIER FAMILY 2 (FACILITATED GLUCOSE TRANSPORTER), MEMBER 1; SLC2A1
606777 GLUT1 DEFICIENCY SYNDROME 1; GLUT1DS1
OMIM 138140 SOLUTE CARRIER FAMILY 2 (FACILITATED GLUCOSE TRANSPORTER), MEMBER 1; SLC2A1
606777 GLUT1 DEFICIENCY SYNDROME 1; GLUT1DS1

Culture Protocols

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Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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