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GM25455 LCL from B-Lymphocyte

Description:

RETT SYNDROME; RTT
METHYL-CPG-BINDING PROTEIN 2; MECP2

Affected:

Yes

Sex:

Female

Age:

18 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Ethnicity Not Hispanic/Latino
Ethnicity Polish/Jewish
Country of Origin ISRAEL
Family Member 1
Family History N
Relation to Proband proband
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks Clinically affected; onset of symptoms at 18 months of age; diagnosed by Rett Syndrome specialist and pediatrician at 2 years and 7 months of age; fatigue; lack of stamina to stand for long periods of time; pronounced hand dyspraxia and stereotypies (hand wringing, washing, and mouthing); loss of language skills; developmental disturbance with relatively severe mental retardation; EEG is moderately abnormal: ictal events with concomitant theta bursts in the posterior head regions, interictal paracentral epileptiform discharges and posterior background abnormality; good eye contact and normal gait suggesting a milder phenotype; normal biogenic amines (metabolites), folates, neurotransmitters, and pterins in cerebrospinal fluid (CSF); blood test showed a significant decrease of mRNA levels of the two isoforms MECP2A and MECP2B; automated fluorescent dye-terminator sequencing shows the subject has a de novo mutation, c.62+1delGT, at the intron 1 splice site of the MECP2 gene; X chromosome inactivation (XCI) studies on a leukocyte derived DNA sample demonstrated a borderline skewing with preferential inactivation of the paternal allele (68%/32%); a slight insignificant tendency was observed towards overexpression of the maternal chromosome in comparison to the paternal chromosome; uses communication/learning device; treatment and management include physical, occupational, and speech therapies; medications include valproate and clonazepam; subject is referred to by the mutation in the publication by Amir RE et al J Med Genet 2005 (PMID 15689438) and as patient H in the publication by Abuhatzira et al. Hum Genet 2005 (PMID 16133181); fibroblast is GM25456.

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by LINE assay
 
Gene MECP2
Chromosomal Location Xq28
Allelic Variant 1 ; RETT SYNDROME
Identified Mutation c.62+1delGT

Phenotypic Data

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Remarks Clinically affected; onset of symptoms at 18 months of age; diagnosed by Rett Syndrome specialist and pediatrician at 2 years and 7 months of age; fatigue; lack of stamina to stand for long periods of time; pronounced hand dyspraxia and stereotypies (hand wringing, washing, and mouthing); loss of language skills; developmental disturbance with relatively severe mental retardation; EEG is moderately abnormal: ictal events with concomitant theta bursts in the posterior head regions, interictal paracentral epileptiform discharges and posterior background abnormality; good eye contact and normal gait suggesting a milder phenotype; normal biogenic amines (metabolites), folates, neurotransmitters, and pterins in cerebrospinal fluid (CSF); blood test showed a significant decrease of mRNA levels of the two isoforms MECP2A and MECP2B; automated fluorescent dye-terminator sequencing shows the subject has a de novo mutation, c.62+1delGT, at the intron 1 splice site of the MECP2 gene; X chromosome inactivation (XCI) studies on a leukocyte derived DNA sample demonstrated a borderline skewing with preferential inactivation of the paternal allele (68%/32%); a slight insignificant tendency was observed towards overexpression of the maternal chromosome in comparison to the paternal chromosome; uses communication/learning device; treatment and management include physical, occupational, and speech therapies; medications include valproate and clonazepam; subject is referred to by the mutation in the publication by Amir RE et al J Med Genet 2005 (PMID 15689438) and as patient H in the publication by Abuhatzira et al. Hum Genet 2005 (PMID 16133181); fibroblast is GM25456.

Publications

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Abuhatzira L, Makedonski K, Galil YP, Gak E, Ben Zeev B, Razin A, Shemer R, Splicing mutation associated with Rett syndrome and an experimental approach for genetic diagnosis Human genetics118:91-8 2005
PubMed ID: 16133181
 
Amir RE, Fang P, Yu Z, Glaze DG, Percy AK, Zoghbi HY, Roa BB, Van den Veyver IB, Mutations in exon 1 of MECP2 are a rare cause of Rett syndrome Journal of medical genetics42:e15 2005
PubMed ID: 15689438

External Links

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Gene Cards MECP2
Gene Ontology GO:0000122 negative regulation of transcription from Pol II promoter
GO:0003677 DNA binding
GO:0003714 transcription corepressor activity
GO:0005634 nucleus
GO:0006355 regulation of transcription, DNA-dependent
NCBI Gene Gene ID:4204
NCBI GTR 300005 METHYL-CpG-BINDING PROTEIN 2; MECP2
312750 RETT SYNDROME; RTT
OMIM 300005 METHYL-CpG-BINDING PROTEIN 2; MECP2
312750 RETT SYNDROME; RTT
Omim Description AUTISM, DEMENTIA, ATAXIA, AND LOSS OF PURPOSEFUL HAND USE
  RETT SYNDROME; RTT
  RTS

Culture Protocols

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Split Ratio 1:7
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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