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GM28942 LCL from B-Lymphocyte

Description:

UBA5-RELATED DISORDER
UBIQUITIN-LIKE MODIFIER ACTIVATING ENZYME 5; UBA5

Affected:

Yes

Sex:

Male

Age:

2 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race Asian
Ethnicity Not Hispanic/Latino
Ethnicity Vietnamese
Country of Origin USA
Family Member 1
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected. See "Phenotypic Data" tab; fibro sample- GM28857; unaffected carrier parents are GM28856(fibro)/GM28954(LCL) and GM28858 (fibro)/GM28953(LCL)

Characterizations

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Gene UBA5
Chromosomal Location 3q22.1
Allelic Variant 1 Mel > Val; UBA5 Related Disorders
Identified Mutation c.169 A>G (p.Met57Val); UBA5 Related Disorders
 
Gene UBA5
Chromosomal Location 3q22.1
Allelic Variant 1 Gln>Leu; UBA5 Related Disorders
Identified Mutation c.935 A>T (p.Gln312Leu); UBA5 Related Disorders
 
Gene AP4S1
Chromosomal Location 14q12
Allelic Variant 1 Trp114X; Spastic paraplegia 52, autosomal recessive
Identified Mutation c.341G>A (p.Trp114X)
 
Gene COQ7
Chromosomal Location 16p12.3
Allelic Variant 1 ; COENZYME Q10 DEFICIENCY, PRIMARY, 8; COQ10D8
Identified Mutation c.508-8T>G

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 2 YR
Sex Male
Age of Onset(If not a control) 3 MO
Age at Diagnosis(If not a control) 1 YR
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category Asian
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  EXOME SEQUENCING REVEALED TWO HETEROZYGOUS, LIKELY PATHOGENIC MUTATIONS IN THE UBA5 GENE (NM_024818.3): C.169 A>G (P.M57V), INHERITED FROM THE MOTHER AND C.935 A>T (P.Q312L) INHERITED FROM THE FATHER
Zygosity:  Heterozygous
Other variants:  A CEREBRAL PALSY SPECTRUM DISORDER PANEL REVEALED TWO HETEROZYGOUS MUTATIONS OF UNCERTAIN SIGNIFICANCE: ONE IN THE AP4S1 GENE C.341G>A (P.TRP114*) AND ANOTHER ON THE COQ7 GENE C.508-8T>G (INTRONIC). MICROARRAY ANALYSIS ALSO REVEALED A VARIANT OF UNKNOWN SIGNIFICANCE: ARR[GRCH37] 4Q13.2Q13.3(6927638_71275343)X1. THE ABNORMALITY IS CHARACTERIZED BY A COPY LOSS OF 63 OLIGONUCLEOTIDE PROBES IN THE LONG ARM OF ONE COPY OF CHROMOSOME 4 FROM Q13.2 TO Q13.3
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  3 MONTHS
Age at Diagnosis:  1 YEAR
In Utero History Information
Birth History Information
Dysmorphic Features
Neurological Symptoms
Cerebral palsy
Dystonia
Hypotonia
Additional Information:  SPASTIC QUADRIPLEGIA CEREBRAL PALSY; ABNORMAL EEG; FAILURE TO THRIVE; DYSPHAGIA, NEUROLOGICAL MOVEMENT DISORDER, BODY JERKS IN SLEEP
Optical and Audiological Symptoms
Additional Information:  CROSSED EYES, ESOPHORIA
Musculoskeletal Symptoms
Additional Information:  MILD COXA VALGA WITH NORMAL FEMORAL HEAD COVERAGE
Developmental Milestones
Global developmental delay
Additional Information:  STARING SPELLS
Gastrointestinal Symptoms
Eating difficulties
Additional Information:  GERD, VOMITTING, GTUBE DEPENDENT FEEDING
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Additional Information:  TACHYPNEA; CHEST X-RAY REVEALED PATCHY BILATERAL NODULAR OPACITIES, AIRWAY THICKENING, AND PROMINENT PULMONARY ARTERIAL CONTOUR
Cognitive and Behavioral Symptoms
Sleep disturbances
Additional Information:  BEHAVIORAL INSOMNIA, SNORING, SEVERE DELAYED SLEEP ONSET
Additional Information
Testing Performed
Treatments and Assistive Devices
Wheelchair or ambulation devices
Orthotics
Communication or learning devices
Additional Testing:  DIAGNOSTIC PSG, EEG, LARYNGOSCOPY, SPECIAL EYE EVALUATION, REFRACTION
Medications
 DIAZEPAM, BACLOFEN
Family History
Remarks Clinically affected. See "Phenotypic Data" tab; fibro sample- GM28857; unaffected carrier parents are GM28856(fibro)/GM28954(LCL) and GM28858 (fibro)/GM28953(LCL)

External Links

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Gene Cards UBA5
NCBI GTR 610552 UBIQUITIN-LIKE MODIFIER ACTIVATING ENZYME 5; UBA5
OMIM 610552 UBIQUITIN-LIKE MODIFIER ACTIVATING ENZYME 5; UBA5

Culture Protocols

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Split Ratio 1:5
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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