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GM28915 iPSC from Blood

Description:

CANCER OF THE BREAST, FAMILIAL; BCS
CHECKPOINT KINASE 2; CHEK2

Affected:

Yes

Sex:

Female

Age:

55 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Hereditary Cancers
PIGI Consented Sample
Protocols Protocol PDF
Biopsy Source Blood
Cell Type Stem cell
Cell Subtype Induced pluripotent stem cell
Transformant Reprogrammed (Sendai)
Sample Source iPSC from Blood
Race White
Ethnicity Not Hispanic/Latino
Ethnicity Irish, English, German, Swiss
Country of Origin USA
Family Member 1
Family History Y
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
ISCN 46,XX[20]
Species Homo sapiens
Common Name Human
Remarks See Phenotypic Data tab. Same donor as GM27948 (fibro) and GM27953 (lymph); see Family Number 3551. Researchers purchasing hiPSCs from the NIGMS Repository are responsible for any limited use label licenses (LULLs) applicable to the cell line purchased. The applicable LULL to this line is Sendai-CytoTune.

Characterizations

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Passage Frozen 11
 
Induced Pluripotent Stem Cell The frozen cell line submitted to the Repository was recovered and expanded. The expanded line was evaluated for viability surface antigen expression and alkaline phosphatase activity. Pluripotency was assessed via embryoid body (EB) formation. Steady-state mRNA expression patterns of undifferentiated iPSC and EBs were determined via real-time PCR. Characterization data are included in the Certificate of Analysis.
 
Gene CHEK2
Chromosomal Location 22q12.1
Allelic Variant 1 ;
Identified Mutation c.190G>A (p.Glu64Lys)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 55 YR
Sex Female
Age of Onset(If not a control) 48 YR
Age at Diagnosis(If not a control) 48 YR
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category White
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  HEREDITARY CANCER TEST (30 GENES) UTILIZING CLINICAL GENOMIC SEQUENCING OF SALIVA DNA REVEALED A HETEROZYGOUS, LIKELY PATHOGENIC VARIANT IN CHEK2: C.190G>A (P.GLU64LYS)
Zygosity:  Heterozygous
Other variants:  BREAST CANCER ASSAY RT-PCR WITH A RECURRENT SCORE RANGE FROM 0-100 WAS USED DETERMINED A BREAST CANCER RECURRENCE SCORE OF 13 (PATIENTS WITH A RECURRENCE SCORE OF 13 HAVE AN AVERAGE RATE OF RECURRENCE OF 9% BASED ON A CLINICAL VALIDATION STUDY
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  48 YEARS
Age at Diagnosis:  48 YEARS; DIAGNOSED BY A RADIOLOGIST
In Utero History Information
Birth History Information
Dysmorphic Features
Additional Information:  DIMPLING AND PALPABLE MASS IN LEFT BREAST; SURGICAL PATHOLOGY RESULTS: INVASIVE BREAST CARCINOMA; LEFT TOTAL MASTECTOMY; INVASIVE DUCTAL CARCINOMA (2.3 X 2.0 X 1.2 CM); PRIMARY TUMOR >20MM BUT < OR = 50MM; FIBROCYSTIC CHANGES, FIBROADENOMATOUS CHANGES, AND ADENOSIS WITH ASSOCIATED MICROCALCIFICATION; PREVIOUS BIOPSY SITE CHANGES; PREVIOUS BREAST CANCER
Neurological Symptoms
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Developmental Milestones
Gastrointestinal Symptoms
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Cognitive and Behavioral Symptoms
Additional Information
Testing Performed
Uncategorized Testing:  IN SITU HYBRIDIZATION REPORT: NEEDLE CORE BIOPSIES OF THE LEFT BREAST REVEALED INVASIVE CARCINOMA; ER+, PR+, HER2-; IMMUNOSTAINS FOR ESTROGEN AND PROGESTERONE RECEPTORS WERE BOTH POSITIVE; THE KI-67 PROLIFERATIVE FRACTION WAS INTERMEDIATE (15.6% POSITIVE); HER2 IMMUNOSTAIN WAS EQUIVOCAL WITH A SCORE OF 2+; FISH RESULTS FOR INVASIVE NEOPLASTIC CELLS SHOWED A NEGATIVE HER2 GENE STATUS AND LOSS OF CHROMOSOME 17 (CHROMOSOME 17 MONOSOMY)
Treatments and Assistive Devices
Additional Testing:  SURGERIES: LEFT MASTECTOMY AND DIEP RECONSTRUCTION
Medications
 TAMOXIFEN
Family History
 FAMILY HISTORY OF CANCER; FATHER HAD LARYNGEAL CANCER; TWO PATERNAL AUNTS HAD BREAST CANCER; ONE PATERNAL UNCLE HAD COLON AND KIDNEY CANCER; ONE PATERNAL AUNT HAD COLON CANCER; TWO PATERNAL GREAT AUNTS HAD BREAST CANCER; PATERNAL GREAT UNCLES HAD VARIOUS CANCERS; PATERNAL FIRST COUSINS HAVE HAD KIDNEY, PROSTATE, PANCREATIC, CHOLANGIOCARCINOMA, AND LYMPHOMA
Remarks See Phenotypic Data tab. Same donor as GM27948 (fibro) and GM27953 (lymph); see Family Number 3551. Researchers purchasing hiPSCs from the NIGMS Repository are responsible for any limited use label licenses (LULLs) applicable to the cell line purchased. The applicable LULL to this line is Sendai-CytoTune.

External Links

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Gene Cards CHEK2
Gene Ontology GO:0000077 DNA damage checkpoint
GO:0004672 protein kinase activity
GO:0004674 protein serine/threonine kinase activity
GO:0005524 ATP binding
GO:0005634 nucleus
GO:0006468 protein amino acid phosphorylation
GO:0006974 response to DNA damage stimulus
GO:0007049 cell cycle
GO:0008151 cell growth and/or maintenance
GO:0016740 transferase activity
NCBI Gene Gene ID:11200
NCBI GTR 114480 BREAST CANCER
604373 CHECKPOINT KINASE 2; CHEK2
OMIM 114480 BREAST CANCER
604373 CHECKPOINT KINASE 2; CHEK2
Omim Description BREAST CANCER, FAMILIALBREAST CANCER, FAMILIAL MALE, INCLUDED
  CANCER OF THE BREAST, FAMILIAL; BCS

Culture Protocols

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Passage Frozen 11
Split Ratio 1:7
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium mTeSR1
Serum none
Substrate Matrigel
Supplement -
Pricing
International/Commercial/For-profit:
$1,789.00USD
U.S. Academic/Non-profit/Government:
$1,110.00USD
Add to Cart
How to Order
  • Ordering Instructions
  • MTA / Assurance Form
  • Statement of Research Intent Form
Related Products
Same Subject
  • NA27953 - DNA
  • GM24538 - B-Lymphocyte
  • GM27948 - Fibroblast
  • GM27953 - B-Lymphocyte
Same Family
  • 3551
Miscellaneous
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