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GM28891 iPSC from Fibroblast

Description:

SCHUURS-HOEIJMAKERS SYNDROME; SHMS
PHOSPHOFURIN ACIDIC CLUSTER SORTING PROTEIN 1; PACS1

Affected:

Yes

Sex:

Female

Age:

9 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Protocols Protocol PDF
Biopsy Source Skin
Cell Type Stem cell
Cell Subtype Induced pluripotent stem cell
Transformant Reprogrammed (Sendai)
Sample Source iPSC from Fibroblast
Race Asian
Ethnicity Not Hispanic/Latino
Ethnicity Bangladeshi
Country of Origin CANADA
Family Member 1
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
ISCN 46,XX[19]
Species Homo sapiens
Common Name Human
Remarks Reprogrammed from parental line GM28210 (fibro); same subject as GM28206 (lymph); unaffected mother is GM28208 (lymph) and GM28211 (fibro) and unaffected father is GM28209 (lymph) and GM28212 (fibro). The Researchers purchasing hiPSCs from the NIGMS Repository are responsible for any limited use label licenses (LULLs) applicable to the cell line purchased. The applicable LULL to this line is Sendai-CytoTune.

Characterizations

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Passage Frozen 13
 
Induced Pluripotent Stem Cell The parental cell line was recovered reprogrammed to an induced pluripotent stem cell line and expanded. The expanded line was evaluated for viability surface antigen expression and alkaline phosphatase activity. Pluripotency was assessed via embryoid body (EB) formation. Steady-state mRNA expression patterns of undifferentiated iPSC and EBs were determined via real-time PCR. Characterization data are included in the Certificate of Analysis.
 
Gene PACS1
Chromosomal Location 11q13.1-q13.2
Allelic Variant 1 607492.0001; SCHUURS-HOEIJMAKERS SYNDROME
Identified Mutation R203W (c.607C>T); In 2 unrelated boys with mental retardation and a strikingly similar facial appearance (SHMS; 615009), Schuurs-Hoeijmakers et al. (2012) identified a recurrent de novo mutation in the PACS1 gene, resulting in a missense mutation (R203W; 607492.0001) in the furin (cargo) binding region directly adjacent to the CK2 binding motif. Schuurs-Hoeijmakers et al. (2012) found that altered PACS1 forms cytoplasmic aggregates in vitro with concomitant increased stability and showed impaired binding to an isoform-specific variant of TRPV4 (605427), but not the full-length protein.

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 9 YR
Sex Female
Age at Diagnosis(If not a control) 3 YR
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category Asian
Country CANADA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  TARGETED SANGER SEQUENCE ANALYSIS DETECTED A HETEROZYGOUS VARIANT IN THE PACS1 GENE (NM_018026.3): C.607C>T(P.ARG203TRP)
Zygosity:  Heterozygous
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  BIRTH
Age at Diagnosis:  3 YEARS
In Utero History Information
Birth History Information
Dysmorphic Features
Neurological Symptoms
Optical and Audiological Symptoms
Defective vision
Musculoskeletal Symptoms
Developmental Milestones
Global developmental delay
Additional Information:  INTELLECTUAL AND DEVELOPMENTAL DISABILITY; COMPLETES 3-PIECE BLOCK DESIGN WITH EXTRAS INDEPENDENTLY; IMITATES A VARIETY OF WORDS AND 10 THREE-WORD PHRASES, FINE MOTOR IMITATION; MANDS FOR PREFERRED ITEMS AND ACTIVITIES INDEPENDENTLY; LABELS UP TO 3 DIFFERENT PARTS OF 8 DIFFERENT OBJECTS; IDENTIFIES WHO, WHAT, WHERE OF PICTURES; FILLS IN 16 ITEMS WHEN GIVEN THE FUNCTION; LOOKS AT THERAPIST WHEN ACCEPTING REINFORCING ITEM; PLAYS DUCK DUCK GOOSE AND RED LIGHT GREEN LIGHT WITH THERAPIST; DRESSES INDEPENDENTLY; WASHES AND DRIES HANDS AND BRUSHES HAIR WITH PROMPTS; READS SIMPLE WORDS INDEPENDENTLY; TRACES SIMPLE LINES AND SHAPES
Gastrointestinal Symptoms
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Cognitive and Behavioral Symptoms
Autism spectrum disorder
Additional Information
Testing Performed
Cognitive and Behavioral Testing:  BASED ON ASSESSMENT OF BASIC LANGUAGE AND LEARNING SKILLS (ABLLS-R) RESULTS: AREAS OF STRENGTH INCLUDE COOPERATION AND REINFORCER EFFECTIVENESS, RECEPTIVE LANGUAGE, MOTOR IMITATION, VOCAL IMITATION, SPONTANEOUS VOCALIZATION, SOCIAL INTERACTION; AREAS OF NEED INCLUDE VISUAL PERFORMANCE, REQUESTS, LABELING, INTRAVERBAL LANGUAGE, PLAY SKILLS, GROUP INSTRUCTION, AND CLASSROOM ROUTINES
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Communication or learning devices
Additional Testing:  ADDITIONAL TREATMENT AND ASSISTIVE DEVICES: ABA (APPLIED BEHAVIOR THERAPY) / IBI (INTENSIVE BEHAVIOR INTERVENTION); GLASSES
Medications
 ANTI-SEIZURE MEDICATION - VALPROIC ACID, CARNITOR; HERBALGEM COMPLEXES G4, G7, G9, G8; ROYAL JELLY
Family History
 MOTHER (LYMPH GM28208, FIBRO GM28211) AND FATHER (LYMPH GM28209, FIBRO GM28212) ARE UNAFFECTED.
Remarks Reprogrammed from parental line GM28210 (fibro); same subject as GM28206 (lymph); unaffected mother is GM28208 (lymph) and GM28211 (fibro) and unaffected father is GM28209 (lymph) and GM28212 (fibro). The Researchers purchasing hiPSCs from the NIGMS Repository are responsible for any limited use label licenses (LULLs) applicable to the cell line purchased. The applicable LULL to this line is Sendai-CytoTune.

External Links

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Gene Cards PACS1
NCBI Gene Gene ID:55690
NCBI GTR 607492 PHOSPHOFURIN ACIDIC CLUSTER SORTING PROTEIN 1; PACS1
615009 SCHUURS-HOEIJMAKERS SYNDROME; SHMS
OMIM 607492 PHOSPHOFURIN ACIDIC CLUSTER SORTING PROTEIN 1; PACS1
615009 SCHUURS-HOEIJMAKERS SYNDROME; SHMS

Culture Protocols

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Passage Frozen 13
Split Ratio 6
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium HES/Human ES Cell Medium
Serum 20% Knock-out Serum Replacement
Substrate Gelatin + Feeder Layer
Supplement Basic Fibroblast Growth Factor 10ng/ml
Pricing
International/Commercial/For-profit:
$1,789.00USD
U.S. Academic/Non-profit/Government:
$1,110.00USD
Add to Cart
How to Order
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