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GM28332 Fibroblast from Skin, Skin

Description:

NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5
BETA-PROPELLER PROTEIN-ASSOCIATED NEURODEGENERATION; BPAN
WD REPEAT-CONTAINING PROTEIN 45; WDR45

Affected:

Yes

Sex:

Female

Age:

6 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Skin
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Skin
Race White
Ethnicity Not Hispanic/Latino
Ethnicity Finish/German
Country of Origin USA
Family Member 1
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks See "Phenotypic Data" tab; LCL is GM28333

Characterizations

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PDL at Freeze 6.7
Passage Frozen 2
 
Gene WDR45
Chromosomal Location Xp11.23
Allelic Variant 1 p.Ala79Thr; NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5
Identified Mutation c.235G>A (p.A79T)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 6 YR
Sex Female
Age of Onset(If not a control) 18 MO
Age at Diagnosis(If not a control) 4 YR
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category White
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  EXOME SEQUENCING OF GENOMIC DNA TARGETING GENES IN A COMPREHENSIVE EPILEPSY PANEL REVEALED A LIKELY PATHOGENIC HETEROZYGOUS DE NOVO VARIANT (C.235 G>A) IN EXON 5 OF THE WDR45 GENE (NM_007075.3) RESULTING IN A NON-CONSERVATIVE SUBSTITUTION (P.ALA79THR). ALIGNED TO HUMAN GENOME BUILD GRCH37/HG19. WHOLE EXOME SEQUENCING DID NOT IDENTIFY ADDITIONAL VARIANTS INTERPRETED TO BE RELATED TO THE PHENOTYPE.
Zygosity:  Heterozygous
Notes: DE NOVO MUTATION
Other variants:  HETEROZYGOUS VARIANT (C.3708 G>T) IN THE POLG GENE (P.GLN1236HIS) INHERITED FROM THE MOTHER
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  18 MONTHS
Age at Diagnosis:  4 YEARS
In Utero History Information
Birth History Information
Jaundice
Caesarian section
Additional Information:  BORN VIA SCHEDULED REPEAT C-SECTION AT 38 WEEKS; MILD JAUNDICE INITIALLY; RSV REQUIRED HOSPITALIZATION AT 6 WEEKS OF AGE
Dysmorphic Features
Microcephaly
Additional Information:  DYSMORPHIC FACIAL FEATURES
Neurological Symptoms
Hypotonia
Seizures
Sleep abnormalities
Unstable gait
Additional Information:  GENERALIZED MYOCLONIC SEIZURES; TRUNCAL HYPOTONIA; GENERALIZED EPILEPSY; EEG AT AGE OF 3 WAS ABNORMAL DUE TO POSSIBLE MYOCLONIC SEIZURES, OCCASIONAL GENERALIZED EPILEPTIFORM DISCHARGES, MILD DIFFUSE BACKGROUND SLOWING, EXCESS BETA ACTIVITY; EEG AT AGE OF 5 WAS MODERATELY ABNORMAL DUE TO INFREQUENT BURSTS OF GENERALIZED EPILEPTIFORM DISCHARGE, MORE PROMINENT IN THE LEFT HEMISPHERE; EEG AT AGE OF 7 WAS ABNORMAL DUE TO INTERMITTENT BRIEF BURSTS EPILEPTIFORM DISCHARGES, OCCASIONAL FRONTAL INTERMITTENT RHYTHMIC DELTA ACTIVITY (FRIDA), MILD DIFFUSE BACKGROUND SLOWING, OCCASIONAL BROAD-BASED SLOW WAVE COMPLEXES IN SLEEP; MRI WITH AND WITHOUT GADOLINIUM CONTRAST AT AGE OF 3 SHOWED SUBTLE SIGNAL ABNORMALITY IN THE DENTATE NUCLEI OF UNCERTAIN ETIOLOGY (MILD INCREASED SIGNAL INTENSITY IN THE DENTATE NUCLEI AND T2-WEIGHTED IMAGES OF UNCERTAIN ETIOLOGY); MRI OF THORACIC AND LUMBAR SPINE WERE NEGATIVE
Optical and Audiological Symptoms
Additional Information:  AUDIOLOGY STUDY AT AGE OF 1 FOUND NORMAL HEARING AND MIDDLE EAR FUNCTION BILATERALLY
Musculoskeletal Symptoms
Additional Information:  LEG LENGTH DISCREPANCY, RESULTING IN USE OF QUARTER INCH LIFT IN LEFT SHOE
Developmental Milestones
Delayed speech and language development
Global developmental delay
Delayed fine motor skills
Additional Information:  SPEECH DELAY; DELAYED MILESTONES; SLOW PROGRESSION OF SKILLS, SPEECH PROGRESSING THE MOST; FIRST WORDS AT 18 MONTHS, SITTING AT 9 MONTHS, WALKING AT 18 MONTHS
Gastrointestinal Symptoms
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Cognitive and Behavioral Symptoms
Sleep disturbances
Intellectual Disability:  Mild
Additional Information:  MOTOR AND SPEECH APRAXIA; TROUBLE WITH BOUNDARIES; TROUBLE MAINTAINING FOCUS AND COOPERATION; DIFFICULTY WITH EXPRESSIVE AND RECEPTIVE LANGUAGE; UNINTELLIGIBLE SPEECH; HISTORY OF SNORING AND MILD OBSTRUCTIVE SLEEP APNEA; HAS LITTLE FEAR AND HIGH PAIN TOLERANCE; NEUROPSYCHOLOGICAL EVALUATION INDICATED THE EXCEPTIONALLY LOW RANGE FOR THE FOLLOWING FIELDS: FULL SCALE INTELLIGENCE QUOTIENT, VERBAL COMPREHENSION, NONVERBAL FLUID REASONING, VISUAL MOTOR INTEGRATION, VISUAL SPATIAL, BRIEF ATTENTION/WORKING MEMORY, ADAPTIVE FUNCTION/ACTIVITIES OF DAILY LIVING, AND VOCABULARY ACQUISITION;
Additional Information
Uncategorized Symptoms:  DIAGNOSED WITH COVID, EXHIBITING MILD SYMPTOMS
Testing Performed
Neurological Testing:  MRI; EEG; ECHO
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Surgeries  OCCUPATIONAL, PHYSICAL, AND SPEECH THERAPY CONDUCTED VIRTUALLY DUE TO COVID PRECAUTIONS
Medications
 LEVETIRACETAM (KEPPRA); DIASTAT
Family History
 SIGNIFICANT FOR ANXIETY, DEPRESSION, AND PANCREATIC CANCER
Remarks See "Phenotypic Data" tab; LCL is GM28333

External Links

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Gene Cards WDR45
NCBI GTR 300526 WD REPEAT-CONTAINING PROTEIN 45; WDR45
300894 NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5
OMIM 300526 WD REPEAT-CONTAINING PROTEIN 45; WDR45
300894 NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5

Culture Protocols

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Cumulative PDL at Freeze 6.7
Passage Frozen 2
Split Ratio 1:6
Temperature 37 C
Percent CO2 5%
Percent O2 3%
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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