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GM28300 LCL from B-Lymphocyte

Description:

RETT SYNDROME; RTT
METHYL-CPG-BINDING PROTEIN 2; MECP2

Affected:

Yes

Sex:

Female

Age:

11 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Ethnicity Not Hispanic/Latino
Ethnicity Polish-Moroccan Jew
Country of Origin ISRAEL
Family Member 1
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks See "Phenotypic Data" tab; fibro is GM28299; unaffected mother is GM28301 (lymph); unaffected sister is GM28302 (lymph).

Characterizations

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Gene MECP2
Chromosomal Location Xq28
Allelic Variant 1 300005.0038; RETT SYNDROME
Identified Mutation c.710delG; 1-bp deletion (710delG) in exon 4 of the MECP2 gene, resulting in a frameshift and premature termination after amino acid 246.

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 11 YR
Sex Female
Age of Onset(If not a control) 6 MO
Age at Diagnosis(If not a control) 2 YR
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category White
Country ISRAEL
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  DNA SEQUENCING OF THE PERIPHERAL BLOOD REVEALED A HETEROZYGOUS MUTATION IN THE MECP2 GENE: C.710DELG
Zygosity:  Heterozygous
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  6 MONTHS
Age at Diagnosis:  2 YEARS; DIAGNOSED BY THE PEDIATRICIAN
In Utero History Information
Birth History Information
Dysmorphic Features
Additional Information:  HEAD CIRCUMFERENCE HAS NOT DECELERATED
Neurological Symptoms
Additional Information:  NO USE OF HANDS; CONSTANT REPETITIVE HAND MOTIONS; ALTHOUGH CONTROLLED WITH MEDICATION, HAS OCCASIONAL SEIZURES; OCCASIONAL TREMORS; TYPICAL SLEEPING PATTERN FOR AGE GROUP
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Additional Information:  SOME DEGREE OF RIGIDITY/SPASTICITY; NO SCOLIOSIS OR KYPHOSIS; FEET SIZE IS PROPORTIONATE WITH BODY SIZE
Developmental Milestones
Additional Information:  NON-VERBAL; WALKS WITH ASSISTANCE; NORMAL HEIGHT (127CM) AND WEIGHT (22KG) FOR AGE
Gastrointestinal Symptoms
Constipation
Eating difficulties
Additional Information:  EATS SLOWLY; DOES NOT HAVE A FEEDING TUBE; NO REFLUX ISSUES; NO ISSUES WITH BLOATING
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Breathing irregularities
Additional Information:  OCCASIONAL BREATHING PROBLEMS; NO ISSUES WITH CIRCULATION
Cognitive and Behavioral Symptoms
Additional Information:  TEETH GRINDING OFTEN/CONSTANT; DOES NOT EXHIBIT SELF-INJURIOUS BEHAVIOR; IRRITABILITY/AGITATION IS SAME AS EXPECTED IN PEERS
Additional Information
Uncategorized Symptoms:  NEVER OR RARELY SICK
Testing Performed
Respiratory and Cardiovascular Testing:  ABNORMAL EEG: MINOR ABNORMALITIES - SLOW WAVES - CENTRO TEMPORAL
Treatments and Assistive Devices
Physical therapy
Speech therapy
Communication or learning devices
Additional Testing:  ADDITIONAL THERAPY: HYDROTHERAPY
Medications
 DEPELEPT, TOPAMAX, TRILEPTIN
Family History
 NO FAMILY HISTORY OF DISEASE; UNAFFECTED MOTHER IS GM28301 (LYMPH); UNAFFECTED SISTER IS GM28302 (LYMPH)
Remarks See "Phenotypic Data" tab; fibro is GM28299; unaffected mother is GM28301 (lymph); unaffected sister is GM28302 (lymph).

External Links

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Gene Cards MECP2
Gene Ontology GO:0000122 negative regulation of transcription from Pol II promoter
GO:0003677 DNA binding
GO:0003714 transcription corepressor activity
GO:0005634 nucleus
GO:0006355 regulation of transcription, DNA-dependent
NCBI Gene Gene ID:4204
NCBI GTR 300005 METHYL-CpG-BINDING PROTEIN 2; MECP2
312750 RETT SYNDROME; RTT
OMIM 300005 METHYL-CpG-BINDING PROTEIN 2; MECP2
312750 RETT SYNDROME; RTT
Omim Description AUTISM, DEMENTIA, ATAXIA, AND LOSS OF PURPOSEFUL HAND USE
  RETT SYNDROME; RTT
  RTS

Culture Protocols

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Split Ratio 1:4
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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