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GM28299 Fibroblast from Skin, Thigh

Description:

RETT SYNDROME; RTT
METHYL-CPG-BINDING PROTEIN 2; MECP2

Affected:

Yes

Sex:

Female

Age:

11 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Thigh
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Thigh
Race White
Ethnicity Not Hispanic/Latino
Ethnicity Polish-Moroccan Jew
Country of Origin ISRAEL
Family Member 1
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks See "Phenotypic Data" tab; lymph is GM28300; unaffected mother is GM28301 (lymph); unaffected sister is GM28302 (lymph).

Characterizations

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PDL at Freeze 3.75
Passage Frozen 1
 
Gene MECP2
Chromosomal Location Xq28
Allelic Variant 1 300005.0038; RETT SYNDROME
Identified Mutation c.710delG; 1-bp deletion (710delG) in exon 4 of the MECP2 gene, resulting in a frameshift and premature termination after amino acid 246.

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 11 YR
Sex Female
Age of Onset(If not a control) 6 MO
Age at Diagnosis(If not a control) 2 YR
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category White
Country ISRAEL
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  DNA SEQUENCING OF THE PERIPHERAL BLOOD REVEALED A HETEROZYGOUS MUTATION IN THE MECP2 GENE: C.710DELG
Zygosity:  Heterozygous
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  6 MONTHS
Age at Diagnosis:  2 YEARS; DIAGNOSED BY THE PEDIATRICIAN
In Utero History Information
Birth History Information
Dysmorphic Features
Additional Information:  HEAD CIRCUMFERENCE HAS NOT DECELERATED
Neurological Symptoms
Additional Information:  NO USE OF HANDS; CONSTANT REPETITIVE HAND MOTIONS; ALTHOUGH CONTROLLED WITH MEDICATION, HAS OCCASIONAL SEIZURES; OCCASIONAL TREMORS; TYPICAL SLEEPING PATTERN FOR AGE GROUP
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Additional Information:  SOME DEGREE OF RIGIDITY/SPASTICITY; NO SCOLIOSIS OR KYPHOSIS; FEET SIZE IS PROPORTIONATE WITH BODY SIZE
Developmental Milestones
Additional Information:  NON-VERBAL; WALKS WITH ASSISTANCE; NORMAL HEIGHT (127CM) AND WEIGHT (22KG) FOR AGE
Gastrointestinal Symptoms
Constipation
Eating difficulties
Additional Information:  EATS SLOWLY; DOES NOT HAVE A FEEDING TUBE; NO REFLUX ISSUES; NO ISSUES WITH BLOATING
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Breathing irregularities
Additional Information:  OCCASIONAL BREATHING PROBLEMS; NO ISSUES WITH CIRCULATION
Cognitive and Behavioral Symptoms
Additional Information:  TEETH GRINDING OFTEN/CONSTANT; DOES NOT EXHIBIT SELF-INJURIOUS BEHAVIOR; IRRITABILITY/AGITATION IS SAME AS EXPECTED IN PEERS
Additional Information
Uncategorized Symptoms:  NEVER OR RARELY SICK
Testing Performed
Respiratory and Cardiovascular Testing:  ABNORMAL EEG: MINOR ABNORMALITIES - SLOW WAVES - CENTRO TEMPORAL
Treatments and Assistive Devices
Physical therapy
Speech therapy
Communication or learning devices
Additional Testing:  ADDITIONAL THERAPY: HYDROTHERAPY
Medications
 DEPELEPT, TOPAMAX, TRILEPTIN
Family History
 NO FAMILY HISTORY OF DISEASE; UNAFFECTED MOTHER IS GM28301 (LYMPH); UNAFFECTED SISTER IS GM28302 (LYMPH)
Remarks See "Phenotypic Data" tab; lymph is GM28300; unaffected mother is GM28301 (lymph); unaffected sister is GM28302 (lymph).

External Links

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Gene Cards MECP2
Gene Ontology GO:0000122 negative regulation of transcription from Pol II promoter
GO:0003677 DNA binding
GO:0003714 transcription corepressor activity
GO:0005634 nucleus
GO:0006355 regulation of transcription, DNA-dependent
NCBI Gene Gene ID:4204
NCBI GTR 300005 METHYL-CpG-BINDING PROTEIN 2; MECP2
312750 RETT SYNDROME; RTT
OMIM 300005 METHYL-CpG-BINDING PROTEIN 2; MECP2
312750 RETT SYNDROME; RTT
Omim Description AUTISM, DEMENTIA, ATAXIA, AND LOSS OF PURPOSEFUL HAND USE
  RETT SYNDROME; RTT
  RTS

Culture Protocols

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Cumulative PDL at Freeze 3.75
Passage Frozen 1
Split Ratio 1:9
Temperature 37 C
Percent CO2 5%
Percent O2 3%
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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