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GM28285 LCL from B-Lymphocyte

Description:

NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5
BETA-PROPELLER PROTEIN-ASSOCIATED NEURODEGENERATION; BPAN
WD REPEAT-CONTAINING PROTEIN 45; WDR45

Affected:

Yes

Sex:

Female

Age:

5 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race Other
Ethnicity Not Hispanic/Latino
Ethnicity Greek/Asian
Country of Origin USA
Family Member 1
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks See "Phenotypic Data" tab

Characterizations

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Gene WDR45
Chromosomal Location Xp11.23
Allelic Variant 1 p.Gln18X; NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5
Identified Mutation c.52C>T (p.Gln18X)
 
Gene CIC
Chromosomal Location 19q13.2
Allelic Variant 1 p.Arg1205Trp; Neurodegeneration with Brain Iron Accummulation
Identified Mutation c.3613C>T (p.Arg1205Trp)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 5 YR
Sex Female
Age of Onset(If not a control) 12 MO
Age at Diagnosis(If not a control) 2 YR
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category Other
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  WHOLE EXOME SEQUENCING OF GENOMIC DNA REVEALED A HETEROZYGOUS LIKELY PATHOGENIC VARIANT (C.52C>T) IN THE WDR45 GENE (RNA REFSEQ NM_007075) RESULTING IN A NONSENSE MUTATION (P.GLN18X). SEQUENCE DATA ALIGNED TO HUMAN GENOME BUILD GRCH37/HG19
Zygosity:  Heterozygous
Other variants:  WHOLE EXOME SEQUENCING OF GENOMIC DNA REVEALED A HETEROZYGOUS VARIANT OF UNCERTAIN SIGNIFICANCE (C.3613C>T) IN THE CIC GENE (RNA REFSEQ NM_015125) RESULTING IN A MISSENSE MUTATION (P.ARG1205TRP)
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  12 MONTHS
Age at Diagnosis:  2 YEARS
In Utero History Information
Assisted reproduction
Additional Information:  IVF
Birth History Information
Caesarian section
Dysmorphic Features
Neurological Symptoms
Ataxia
Hypotonia
Seizures
Unstable gait
Additional Information:  SUBTLE BEHAVIORAL ARREST NON-RESPONSIVE SEIZURES; COGNITIVE DELAYS; MRI SHOWED IRON ACCUMULATION IN THE BRAIN; EEG DETECTED IRREGULARLY GENERALIZED EPILEPTIFORM DISCHARGES AND OCCASIONAL, INDEPENDENT LEFT AND RIGHT TEMPORAL SHARP WAVES; CENTRAL HYPOTONIA; ATAXIC BROAD-BASED GAIT; BRAIN ATROPHY; MRI WITHOUT CONTRAST DETECTED DIFFUSELY LOW WHITE MATTER VOLUME WITH THINNING OF THE CORPUS CALLOSUM AND BRAINSTEM AND PROMINENCE OF THE SULCI AND VENTRICLES;
Optical and Audiological Symptoms
Defective vision
Additional Information:  CEREBRAL VISUAL IMPAIRMENT (CVI); DECREASED EYE CONTACT; BILATERAL BLURRED VISION
Musculoskeletal Symptoms
Developmental Milestones
Delayed speech and language development
Global developmental delay
Delayed fine motor skills
Delayed gross motor skills
Additional Information:  NON-VERBAL; GROSS/FINE MOTOR ISSUES; ORAL AND VERBAL DYSPRAXIA
Gastrointestinal Symptoms
Constipation
Eating difficulties
Additional Information:  SLOWER EATING; SWALLOWING PROBLEM; GLUTATHIONE WAS LOW INITIALLY, NOW NORMAL; VITAMIN D DEFICIENCY
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Cognitive and Behavioral Symptoms
Behavioral problems
Autism spectrum disorder
Sleep disturbances
Additional Information:  FREQUENT BRUXISM; OCCASIONALLY BREATHHOLD; ABNORMAL BEHAVIORS SUCH AS NOT OBSERVING NORMAL PERSONAL BOUNDARIES; REFLEXES DIFFICULT TO ELICIT; PRESENTS WITH IMPAIRMENTS OF: COORDINATION, MOBILITY, COGNITION, KNOWLEDGE, TEMPORAL ORGANIZATION, ORGANIZATION OF SPACE AND OBJECTS, MEMORY, PERCEPTION, CONTROL OF INTERNAL RESPONSE STATES, SELF-CONSOLING, SENSORY RESPONSES, REACTION TO ENVIRONMENT, AND POSTURING; NO EXPRESSIVE LANGUAGE
Additional Information
Testing Performed
Neurological Testing:  MRI; EEG
Metabolic, Hematologic, and Endocrinologic Testing:  EVALUATION OF HPA AXIS WAS NORMAL; ELECTRON TRANSPORT CHAIN ANALYSIS DID NOT SHOW ANY DEFICIENCIES
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Wheelchair or ambulation devices
Orthotics
Communication or learning devices
Additional Testing:  EYE GAZE DEVICE FOR COMMUNICATION
Medications
 LEVETIRACETAM (KEPPRA); SENNOSIDES (SENNA); AQUEOUS VITAMIN D; DIAZEPAM; FLUTICASONE; FEXOFENADINE; MELATONIN
Family History
 FATHER HAD LEUKEMIA
Remarks See "Phenotypic Data" tab

External Links

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Gene Cards WDR45
NCBI GTR 300526 WD REPEAT-CONTAINING PROTEIN 45; WDR45
300894 NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5
OMIM 300526 WD REPEAT-CONTAINING PROTEIN 45; WDR45
300894 NEURODEGENERATION WITH BRAIN IRON ACCUMULATION 5; NBIA5

Culture Protocols

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Split Ratio 1:4
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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