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GM28074 LCL from B-Lymphocyte

Description:

GELEOPHYSIC DYSPLASIA 1; GPHYSD1
ADAMTS-LIKE PROTEIN 2; ADAMTSL2

Affected:

No Data

Sex:

Male

Age:

18 MO (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Ethnicity European, Middle Eastern
Country of Origin USA
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Affected. Mild symptoms. See "Phenotypic Data" Tab. Heterozygous mutations in the ADAMTSL2 gene: c.182G>A (p.R61H) and c.493G>A (p.A165T). Both are variants of Uncertain significance, and it is unknown whether they are on the same allele or on different alleles.

Characterizations

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Gene ADAMTSL2
Chromosomal Location 9q34.2
Allelic Variant 1 p.Arg61His; Geleophysic Dysplasia
Identified Mutation c.182G>A (p.R61H)
 
Gene ADAMTSL2
Chromosomal Location 9q34.2
Allelic Variant 2 p.Ala165Thr; Geleophysic Dysplasia
Identified Mutation c.493G>A (p.Ala165Thr)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 18 MO
Sex Male
Age at Diagnosis(If not a control) 1 YR
Racial Category White
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  CLINICAL EXOME SEQUENCE ANALYSIS REVEALED THAT THIS INDIVIDUAL IS HETEROZYGOUS FOR TWO AUTOSOMAL RECESSIVE VARIANTS OF UNKNOWN SIGNIFICANCE IN THE ADAMTSL2 GENE (NM_014694.3): C.182G>A (P.R61H) IN EXON 3 AND C.493G>A (P.A165T) IN EXON 6
Zygosity:  Heterozygous
Other variants:  NEXT GENERATION SEQUENCING IDENTIFIED THE FOLLOWING VARIANTS: C.3746A>T (P.D1249V) IN THE DYNC2H1 GENE AND C.1892C>T (P.A631V)IN THE GNPAT GENE
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  ONSET OF SYMPTOMS EARLY IN LIFE
Age at Diagnosis:  DIAGNOSED AT 1 YEAR OF AGE BY A GENETICIST
In Utero History Information
Additional Information:  CYSTIC HYDROMA SPONTANEOUS DECELERATION LASTING 6 MINUTE
Birth History Information
Dysmorphic Features
Additional Information:  DYSMORPHIC FACIAL FEATURES; BRACHYCEPHALY; MILD LID COLOBOMA; BULBOUS NOSE; POSTERIORLY ROTATED LOW-SET EARS; SMALL MOUTH MICROGNATHIA; SHORT NECK
Neurological Symptoms
Additional Information:  FAILED AUDITORY BRAINSTEM RESPONSE (ABR) TESTING, BUT REPEAT ABR UNDER GENERAL ANESTHESIA WAS NORMAL; POSITIVE FOR SNORING AND MOUTH BREATHING; LOUD BREATHING AT NIGHT, BUT NO APNEA; SNORES LOWER LIMBS AND ARMS ARE TIGHT;
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Additional Information:  SHORT STATURE; SHORT-LIMBED; SHORT FINGERS; LOWER EXTREMITIES CANNOT BE FULLY EXTENDED BILATERALLY; ESPECIALLY TIGHT ACHILLES HEEL
Developmental Milestones
Delayed gross motor skills
Abnormal height for age
Walking Without Assistance:  Achieved and maintained
Additional Information:  MILD GROSS MOTOR DELAYS; PULLING TO STAND AND WALKING WITH HELP ON
Gastrointestinal Symptoms
Additional Information:  DYSPHAGIA; STAYED IN HOSPITAL FOR A MONTH FOR SEVERE FEEDING PROBLEMS; PROBLEMS COORDINATING SWALLOWING AND SUCKING; STRUGGLES EATING AND BREATHING
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Heart murmur
Additional Information:  MILD PULMONARY STENOSIS; HEART GALLOP AND MURMUR PATENT FORAMEN OVALE
Cognitive and Behavioral Symptoms
Additional Information:  FACE TURNS BLUE WHEN CRYING
Additional Information
Uncategorized Symptoms:  CYSTIC HYGROMA (SMALL NECK MASS)
Testing Performed
Musculoskeletal and Developmental Testing:  X-RAYS SHOWED POSSIBLE SHORTENING OF UPPER LIMBS
Respiratory and Cardiovascular Testing:  CARDIAC ECHO SHOWED SMALL STRUCTURAL CHANGE
Uncategorized Testing:  AMNIOTIC FLUID CHROMOSOME TEST, DIGEORGE FISH, MICROARRAY AND WES FOR NOONAN SYNDROME-ASSOCIATED SYNDROMES WERE ALL NEGATIVE; NORMAL "SLICE FOR NOONAN SYNDROME ASSOCIATED SYNDROMES
Treatments and Assistive Devices
Physical therapy
Medications
Family History
 PARENTS ARE NOT RELATED; MOTHER CARRIES ONE OF THE ADAMTSL2 VARIANT COPIES; FATHER WAS NOT FOUND TO HAVE A DEFECT BUT IS POSSIBLY A MOSAIC GONADAL CARRIER; MOTHER HAS MILD BITEMPORAL NARROWING, SMALL MOUTH AND CHIN, POSTERIOR ROTATED EARS AND WIDE-SPACED NIPPLES SIMILAR TO THAT OF PROBAND
Remarks Affected. Mild symptoms. See "Phenotypic Data" Tab. Heterozygous mutations in the ADAMTSL2 gene: c.182G>A (p.R61H) and c.493G>A (p.A165T). Both are variants of Uncertain significance, and it is unknown whether they are on the same allele or on different alleles.

External Links

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Gene Cards ADAMTSL2
NCBI GTR 231050 GELEOPHYSIC DYSPLASIA 1; GPHYSD1
612277 ADAMTS-LIKE PROTEIN 2; ADAMTSL2
OMIM 231050 GELEOPHYSIC DYSPLASIA 1; GPHYSD1
612277 ADAMTS-LIKE PROTEIN 2; ADAMTSL2
Omim Description GELEOPHYSIC DYSPLASIA

Culture Protocols

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Split Ratio 1:2
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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