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GM28047 LCL from B-Lymphocyte

Description:

CEREBRAL CREATINE DEFICIENCY SYNDROME 1; CCDS1
SOLUTE CARRIER FAMILY 6 (NEUROTRANSMITTER TRANSPORTER, CREATINE), MEMBER 8; SLC6A8

Affected:

Yes

Sex:

Male

Age:

6 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Ethnicity Not Hispanic/Latino
Country of Origin USA
Family Member 1
Family History Y
Relation to Proband proband
Species Homo sapiens
Common Name Human
Remarks Clinically affected proband. See "Phenotypic Data" Tab. Affected mother is GM28048 (lymph); Clinically affected brothers are GM28028 (lymph) and GM28061 (lypmh).

Characterizations

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Gene SLC6A8
Chromosomal Location Xq28
Allelic Variant 1 Phe107del; CEREBRAL CREATINE DEFICIENCY SYNDROME 1; CCDS1
Identified Mutation c.321_323delCTT (p.Phe107del)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 6 YR
Sex Male
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category White
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  WHOLE GENOME SEQUENCING REVEALED THAT SUBJECT HAS A HEMIZYGOUS X-LINKED DELETION IN SLC6A8: C.321_323DELCTT (P.PHE107DEL)
Zygosity:  Other
Notes: HEMIZYGOUS FOR X-LINKED DISORDER
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  BIRTH
Age at Diagnosis:  BIRTH: DIAGNOSED BY A GENETICIST
In Utero History Information
Additional Information:  GESTATIONAL AGE: FULL TERM; INDUCED VAGINAL DELIVERY; BIRTH WEIGHT: 8 LB 11 OZ; COMPLICATIONS IN THE FIRST MONTH INCLUDED HYPOGLYCEMIA; INITIAL BLOOD SUGAR WAS 34 BUT IT RESOLVED WHEN GIVEN FORMULA
Birth History Information
Failure to thrive
Positive newborn screen
Additional Information:  ON FIRST DAY AFTER BIRTH, BIOCHEMICAL TESTING REVEALED THAT SUBJECT HAD A MILD ELEVATION OF CREATINE: PLASMA CREATINE 88.9 UMOL/L (NORMAL RANGE: 2-109) AND URINE CREATINE 1225 MMOL/MOL (NORMAL RANGE: 3.8-947); AT 2.5 MONTHS, THE URINE WAS MARKEDLY ELEVATED TO 3338 MMOL/MOL; HEIGHT: 10TH %ILE; WEIGHT: 45 %ILE, BMI 15.18 KG/M2, HC 42 CM; AT 4 MONTHS: BMI 15.18 KG/M2; LIGHT OR DARK BIRTH MARKS; BIRTH MARK (PORT WINE) ON LEFT THIGH; RED BIRTHMARK ON THE BACK OF THE NECK - SIZE AND TEXTURE ARE STABLE; POOR WEIGHT GAIN; SIGNIFICANT PROBLEMS WITH CONSTIPATION AND VOMITING IN THE FIRST FEW MONTHS; INTESTINAL MUSCLES DID NOT SYNCHRONIZE PROPERLY, CAUSING CONSTIPATION
Dysmorphic Features
Neurological Symptoms
Hypotonia
Seizures
Sleep abnormalities
Additional Information:  HAD ONE GENERALIZED TONIC-CLONIC SEIZURE AND ANOTHER SEIZURE, BUT NONE SINCE TREATMENT WITH KEPPRA; SLEEP MYOCLONUS; ABNORMAL MOVEMENT; GAZE IS CONJUGATE, TONE IS SLIGHTLY LOW GENERALLY
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Additional Information:  HYPERFLEXIBLE
Developmental Milestones
Delayed speech and language development
Global developmental delay
Additional Information:  DEVELOPMENTAL MILESTONES AT 3 MONTHS OF AGE: GROSS MOTOR - ABLE TO HOLD HEAD UP, FINE - REACH FOR OBJECTS, LANGUAGE - COOING, SOCIAL - SMILES, REGARDS OBJECTS; WALKED AND ALMOST RUNNING AROUND 2 YEARS; AT 4 YEARS MAKES SOME SOUNDS SUCH AS DADA, MAMA, GAGA BUT IS VOCALIZING LITTLE; AT 5 YEARS: BASED ON CDC BOYS 2-20 YEARS DATA, 14%ILE WEIGHT, 8 %ILE HEIGHT/STATURE, BMI: 51%; APPEARS WELL-NOURISHED; SITS STABLY AND WALKS INDEPENDENTLY
Gastrointestinal Symptoms
Constipation
Additional Information:  REFLUX AND VOMITING
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Additional Information:  SNORES AT NIGHT; LEFT VENTRICULAR NON-COMPACTION CARDIOMYOPATHY
Cognitive and Behavioral Symptoms
Anxiety
Autism spectrum disorder
Sleep disturbances
Additional Information:  SNORING DURING SLEEP AT NIGHT, SO IS GIVEN NEURONTIN; SENSORY ISSUES; DRAGS HEAD ALONG THE FLOOR; BANGS HEAD ON THE WALL OR WINDOW; SEPARATION ANXIETY; STRANGER ANXIETY; LIKES TO LICK THINGS; POOR EYE CONTACT; WITHDRAWN; SELF-STIMULATORY BEHAVIOR; SPINNING ON KNEES AND HAND FLAPPING; DOES NOT LIKE TO HAVE HAIR WASHED
Additional Information
Testing Performed
Metabolic, Hematologic, and Endocrinologic Testing:  AT 4-5 YEARS: PLASMA CREATINE 89.7 (NORMAL 3-114 UMOL/L), PLASMA GUANIDINOACETATE 1.21 (0.1-1.7 UMOL/L), PLASMA AMINO ACIDS: GLYCINE 251 (81-436), ARGININE 32.7 (12-133)
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Orthotics
Additional Testing:  WEARS ANKLE BRACES; ADDITIONAL THERAPY: PSYCHOLOGICAL THERAPY; ABA THERAPY SURGERIES: COLONOSCOPY W/ BIOPSY; ESOPHAGOGASTODOUDENOSCOPY W/ BIOPSY; ESOPHAGOGASTODOUDENOSCOPY W/ REMOVAL FOREIGN BODY; GASTROSTOMY W/ FEEDING TUBE
Medications
 MAGNESIUM HYDROXIDE, OMEPRAZOLE (PRILOSEC); (MILK OF MAGNESIA); SUPPLEMENTS (CAUSE SEVERE DIARHREA): L-ARGININE, FOR A SHORT TIME: CREATINE MONOHYDRATE, GLYCINE; KEPPRA, NEURONTIN; TYLENOL, ZYRTEC, DIASTAT ACUDIAL, BENADRYL ALLERGY, FLONASE, GLYCERIN SUPPOSITORY, IBRUPROFEN, PREVACID, REGLAN, BACTROBAN, MYCOSTATIN, MIRALAX, MELATONIN, PROAIR HFA, ZINC OXIDE 20% OINTMENT, ORALYTE, CYPROHEPTADINE
Family History
 SUBJECT AND TWO OF HIS FULL BROTHERS ALSO HAVE THE SAME DIAGNOSIS AND VERY SIMILAR CLINICAL PRESENTATIONS OF SEIZURE AND GLOBAL DEVELOPMENTAL DELAY; AFFECTED BROTHER (GM28028) HAS SAME DIAGNOSIS AND X-LINKED HEMIZYGOUS GENE DELETION IN SLC6A8 (C.321_323DELCTT); MOTHER (GM28048) IS A CARRIER FOR X-LINKED CREATINE TRANSPORTER DEFICIENCY SYNDROME AND HAS THE SAME DELETION IN SLC6A8 GENE THAT WAS IDENTIFIED IN HER TWO SONS; MATERNAL UNCLE HAS INTELLECTUAL AND SPEECH DISABILITY, AUTISTIC FEATURES, NEEDS HELP WITH DAILY LIVING SKILLS, HAS CONSTIPATION, AND HAD SEIZURES AT A YOUNG AGE; MATERNAL GRANDMOTHER HAS TWO SISTERS WITH MENTAL ILLNESS; PATERNAL UNCLE HAS LEARNING DISABILITIES AND BEHAVIORAL PROBLEMS; ANOTHER COUSIN HAS SEVERE MENTAL RETARDATION; PATERNAL GRANDMOTHER HAS NEPHEW WITH HIRSCHSPRUNG DISEASE AND MISPLACED ORGANS CORRECTED BY SURGERY; NO CONSANGUINITY.
Remarks Clinically affected proband. See "Phenotypic Data" Tab. Affected mother is GM28048 (lymph); Clinically affected brothers are GM28028 (lymph) and GM28061 (lypmh).

External Links

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Gene Cards SLC6A8
Gene Ontology GO:0001504 neurotransmitter uptake
GO:0005309 creatine:sodium symporter activity
GO:0005328 neurotransmitter:sodium symporter activity
GO:0005887 integral to plasma membrane
GO:0006836 neurotransmitter transport
GO:0006936 muscle contraction
GO:0015293 symporter activity
NCBI Gene Gene ID:6535
NCBI GTR 300036 SOLUTE CARRIER FAMILY 6 (NEUROTRANSMITTER TRANSPORTER, CREATINE), MEMBER 8; SLC6A8
300352 CEREBRAL CREATINE DEFICIENCY SYNDROME 1; CCDS1
OMIM 300036 SOLUTE CARRIER FAMILY 6 (NEUROTRANSMITTER TRANSPORTER, CREATINE), MEMBER 8; SLC6A8
300352 CEREBRAL CREATINE DEFICIENCY SYNDROME 1; CCDS1

Culture Protocols

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Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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