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GM28034 Fibroblast from Skin, Skin

Description:

LEIGH SYNDROME; LS
SURFEIT 1; SURF1

Affected:

Yes

Sex:

Male

Age:

5 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Skin
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Skin
Race White
Ethnicity Italian-Spanish
Country of Origin ARGENTINA
Family Member 1
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks See Phenotypic Data tab. Clinically affected; has one affected sibling in family 3519: Unaffected carrier mother is GM28035 (fibro), Unaffected carrier father is GM28036 (fibro), affected brother is GM28033 (fibro).

Characterizations

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PDL at Freeze 5.42
Passage Frozen 2
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 1 p.Trp278*; LEIGH SYNDROME
Identified Mutation c.834G>A (p.Trp278*)
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 2 185620.0014; LEIGH SYNDROME
Identified Mutation c.845_846delCT (p.Ser282Cysfs*9); In 9 of 40 unrelated patients with mitochondrial complex IV deficiency (MC4DN1; 220100) manifest as Leigh syndrome, Pequignot et al. (2001) identified a 2-bp deletion in the SURF1 gene (845delCT).

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 5 YR
Sex Male
Age of Onset(If not a control) 2 MO
Age at Diagnosis(If not a control) 2 YR
Racial Category White
Country ARGENTINA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  NEXT GENERATION SEQUENCING OF A LEIGH DISEASE PANEL OF 82 GENES REVEALED COMPOUND HETEROZYGOUS MUTATIONS IN EXON 9 OF THE SURF1 GENE, C.834G>A (P.W278*) AND C.845_846DELCT (P.S282CFS*9)
Zygosity:  Compound Heterozygous
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  2 MONTHS
Age at Diagnosis:  2 YEARS
In Utero History Information
Birth History Information
Failure to thrive
Dysmorphic Features
Additional Information:  DIFFUSE HYPERTRICHOSIS AT 16 MONTHS
Neurological Symptoms
Hypotonia
Additional Information:  SEVERELY LAX AND GENERALIZED HYPOTONIA FROM 16 MONTHS; CONTINUED SEVERE HYPOTONIA AND WEAKNESS FROM 3 YEARS
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Kyphosis
Additional Information:  GENU RECURVATUM; DECREASED MUSCULAR STRENGTH; DECREASED BONE MINERAL CONTENT
Developmental Milestones
Global developmental delay
Additional Information:  AT 16 MONTHS: STABLE SITTING POSITION WITH DORSAL KYPHOSIS, STAND ALONE WITH LUMBAR LORDOSIS, REQUIRES HAND TO WALK WITH INSTABILITY
Gastrointestinal Symptoms
Additional Information:  PRESENTED DURING THE FIRST YEAR WITH PERSISTENT VOMITING THAT LEAD TO DEHYDRATION
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Additional Information:  INCREASED RESPIRATORY INFECTIONS FROM 2.9 YEARS OLD;
Cognitive and Behavioral Symptoms
Additional Information:  AMIMIA AT 16 MONTHS
Additional Information
Uncategorized Symptoms:  FISH ANALYSIS REVEALED A NORMAL KARYOTYPE OF 46, XY
Testing Performed
Neurological Testing:  BRAIN MRI HYPERINTENSE IMAGES IN T2/FLAIR AND DWI OF PUTAMEN AND PERLAQUEDUCTAL GRAY MATTER OF BRAIN STEM, SUBTHALMIC NUCLEI AND DETATE NUCLEI
Metabolic, Hematologic, and Endocrinologic Testing:  GCMS SHOWED MILD ELEVATION OF CITRIC ACID AND 3OH ADIPIC ACID, NORMAL LACTIC ACID AT FAST (2.01 MMOL/L) AND MILD ELEVATION AFTER MEAL (3.42 MMOL/L), DECREASED FREE (20 UMOL/ML) AND TOTAL CARNITINE (31 UMOL/ML)
Treatments and Assistive Devices
Physical therapy
Speech therapy
Medications
 IDEBENONE; THIAMINE; CARNITINE; RIBOFLAVIN; NUTRITIONAL SUPPLEMENTS (FERRO SULFATE, FOLIC ACID, NA BICARBONATE); INCREASED CALORIC AND PROTEIN INTAKE BY NOCTURNAL NASOGASTRIC DRIP MILDLY IMPROVED THRIVE, WHILE MILD KETOGENIC DIET DETERIORATED THRIVE AND INDUCED METABOLIC ACIDEMIA
Family History
Remarks See Phenotypic Data tab. Clinically affected; has one affected sibling in family 3519: Unaffected carrier mother is GM28035 (fibro), Unaffected carrier father is GM28036 (fibro), affected brother is GM28033 (fibro).

External Links

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Gene Cards MTATP6
SURF1
Gene Ontology GO:0004129 cytochrome-c oxidase activity
GO:0005739 mitochondrion
GO:0005746 mitochondrial electron transport chain
GO:0006118 electron transport
GO:0008535 cytochrome c oxidase biogenesis
GO:0009060 aerobic respiration
GO:0016021 integral to membrane
GO:0019866 inner membrane
NCBI Gene Gene ID:6834
NCBI GTR 185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
OMIM 185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
Omim Description LEIGH SYNDROME
  NECROTIZING ENCEPHALOPATHY, INFANTILE SUBACUTE, OF LEIGH; SNE

Culture Protocols

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Cumulative PDL at Freeze 5.42
Passage Frozen 2
Split Ratio 1:5
Temperature 37 C
Percent CO2 5%
Percent O2 3%
Medium Eagles Minimum Essential Medium with Earle's salts:Dulbecco's modified MEM with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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