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GM28029 Fibroblast from Skin, Skin

Description:

LEIGH SYNDROME; LS
SURFEIT 1; SURF1

Affected:

Yes

Sex:

Female

Age:

4 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Skin
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Skin
Race More than one race
Ethnicity Hispanic/Latino
Ethnicity Native American (Cherokee), White, Mexican
Country of Origin USA
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
ISCN 46,XX[18]
Species Homo sapiens
Common Name Human
Remarks Clinically affected; See "Phenotypic Data" tab.

Characterizations

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PDL at Freeze 8.78
Passage Frozen 3
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 1 185620.0003; LEIGH SYNDROME
Identified Mutation c.312_321del10insAT (p.Leu105*)
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 2 Arg230*; LEIGH SYNDROME
Identified Mutation c.688C>T (p.Arg230*)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 4 YR
Sex Female
Age at Diagnosis(If not a control) 4 YR
Hispanic or Latino/Not Hispanic or Latino Hispanic/Latino
Racial Category More than one race
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  WHOLE EXOME SEQUENCING (WES) OF GENOMIC DNA TRIO ANALYSIS REVEALED 2 PATHOGENIC VARIANTS ASSOCIATED WITH AUTOSOMAL RECESSIVE LEIGH SYNDROME AND SURF1 MITOCHONDRIAL COMPLEX IV DEFICIENCY; COMPOUND HETEROZYGOUS VARIANTS IN THE SURF1 GENE: MATERNALLY INHERITED C.312_321DELINSAT (P.LEU105*) IN EXON 4 AND PATERNALLY INHERITED C.688C>T (P.ARG230*) IN EXON 7
Zygosity:  Compound Heterozygous
Age of Symptom Onset and Age at Diagnosis
Age at Diagnosis:  DIAGNOSED AT 4 YEARS OF AGE BY A GENETICIST
In Utero History Information
Birth History Information
Failure to thrive
Dysmorphic Features
Additional Information:  HIRSUTISM
Neurological Symptoms
Ataxia
Additional Information:  DYSMETRIA, TREMOR; NEUROLOGICAL REGRESSION, GAIT ATAXIA, BRAINSTEM AND CERVICAL SPINAL CORD LESIONS SUGGESTIVE OF BRAINSTEM ENCEPHALITIS OR ADEM OR MILLER FISCHER)
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Additional Information:  MUSCLE WEAKNESS, SHORT STATURE
Developmental Milestones
Delayed speech and language development
Delayed gross motor skills
Running:  Not achieved and not maintained
Additional Information:  REGRESSION IN SPEECH - SLOW SPEECH; <50% SPEECH INTELLIGIBLE AT 3 YEARS OF AGE; NO JUMPING OR RUNNING
Gastrointestinal Symptoms
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Cognitive and Behavioral Symptoms
Additional Information
Uncategorized Symptoms:  HISTORY OF GUILLAIN-BARRE, SURF1-ASSOCIATED MITOCHONDRIAL COMPLEX IV DEFICIENCY
Testing Performed
Neurological Testing:  BRAIN STEM AND CERVICAL CORD LESIONS
Cognitive and Behavioral Testing:  ABNORMAL BRAIN MRI SHOWING DEGENERATIVE DISEASE; INVOLVEMENT OF THE SUBTHALAMIC; CEREBELLUM ATROPHY WILL DEVELOP OVER TIME
Uncategorized Testing:  KARYOTYPE NEGATIVE, 46,XX
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Additional Testing:  PHYSICAL EXAM AT 4 YEARS OF AGE: GENERALLY HEALTHY-LOOKING, NO CARDIO-RESPIRATORY DISTRESS, ANICTERIC, ACYANOTIC, WELL-NOURISHED, WLL-HYDRATED, AWAKE, ALERT, NORMAL CHEST CONFIGURATION, HEAD NORMOCEPHALIC, EARS AND EYES NORMAL, NORMAL BREATH SOUNDS ON AUSCULTATION, NO HEART MURMURS, NO PERIPHERAL EDEMA, REGULAR RATE AND RHYTHM, NO VISCEROMEGALY, NO MASSES, NORMOACTIVE BOWEL SOUNDS, NO SCOLIOSIS, NORMAL GENITALIA, NO PETECHIAE OR HYPER- OR HYPO- SKIN PIGMENTED LESIONS, HYPERMOBILE JOINTS, NEUROLOGICAL: LOW TONE TITUBATION, DYSMETRIA, TREMOR, ATAXIA, ASSESSMENT: DEMYELINATING CNS DISEASE AND MITOCHONDRIAL METABOLISM DISORDERS
Medications
 MITO COCKTAIL WITH COENZYMEQ-10, VITAMIN C, VITAMIN E, VITAMIN B COMPLEX, AND ANTIOXIDANTS
Family History
 MOTHER IS HETEROZYGOUS FOR C.312_321DELINSAT (P.LEU105*) AND FATHER IS HETEROZYGOUS FOR C.688C>T (P.ARG230*) VARIANT IN THE SURF1 GENE; HEALTHY MOTHER; HEALTHY FATHER WITH DYSLEXIA; HEALTHY FULL-SISTER; PATERNAL HALF SISTER IS IN SPEECH THERAPY BUT IS OTHERWISE HEALTHY; MATERNAL AUNT HAS DIGESTIVE PROBLEMS; MATERNAL HALF-UNCLE WITH UNKNOWN HEALTH HISTORY; MATERNAL GRANDFATHER HAS COLON CANCER; HEALTHY MATERNAL GRANDMOTHER; HEALTHY PATERNAL AUNT WITH HEALTHY CHILDREN; PATERNAL HALF UNCLE HAS A RIB THAT STICKS OUT SIMILAR TO THAT OF THE PATIENT, BUT IS HEALTHY; PATERNAL GRANDFATHER WITH AN UNKNOWN HEALTH HISTORY; PATERNAL GRANDMOTHER WITH DIABETES AND BREAST CANCER; PATERNAL GREAT-GRANDMOTHER DIED OF BREAST CANCER; PATERNAL GREAT-GREAT GRANDMOTHER ALSO HAD BREAST CANCER; MATERNAL ANCESTRY IS ENGLISH/GERMAN; PATERNAL ANCESTRY IS MEXICAN/NATIVE AMERICAN/CAUCASIAN; NO CONSANGUINITY
Remarks Clinically affected; See "Phenotypic Data" tab.

External Links

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Gene Cards MTATP6
SURF1
Gene Ontology GO:0004129 cytochrome-c oxidase activity
GO:0005739 mitochondrion
GO:0005746 mitochondrial electron transport chain
GO:0006118 electron transport
GO:0008535 cytochrome c oxidase biogenesis
GO:0009060 aerobic respiration
GO:0016021 integral to membrane
GO:0019866 inner membrane
NCBI Gene Gene ID:6834
NCBI GTR 185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
OMIM 185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
Omim Description LEIGH SYNDROME
  NECROTIZING ENCEPHALOPATHY, INFANTILE SUBACUTE, OF LEIGH; SNE

Culture Protocols

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Cumulative PDL at Freeze 8.78
Passage Frozen 3
Split Ratio 1:8
Temperature 37 C
Percent CO2 5%
Percent O2 3%
Medium Eagles Minimum Essential Medium with Earle's salts:Dulbecco's modified MEM with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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