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GM28021 Fibroblast from Skin, Skin

Description:

LEIGH SYNDROME; LS
SURFEIT 1; SURF1

Affected:

Yes

Sex:

Male

Age:

6 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Skin
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Skin
Race White
Ethnicity Not Hispanic/Latino
Ethnicity Dutch
Country of Origin USA
Family Member 5
Family History N
Relation to Proband brother
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks See "Phenotypic Data" tab. Clinically affected; has two affected siblings in family 3515: GM28019 (sister) and GM28020 (brother). Carrier parents are GM28022 (mother) and GM28023 (father).

Characterizations

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PDL at Freeze 9.09
Passage Frozen 3
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 1 p.L90P; LEIGH SYNDROME
Identified Mutation c.269T>C (p.L90P)
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 2 185620.0003; LEIGH SYNDROME
Identified Mutation c.312_321del10insAT (p.Leu105*)

Phenotypic Data

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Demographic Data
Relation to Proband brother
Age at Sampling 6 YR
Sex Male
Age of Onset(If not a control) 3 YR
Age at Diagnosis(If not a control) 4 YR
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category White
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  POSITIVE FOR FAMILIAL SURF1 MUTATION; WHOLE EXOME SEQUENCING REVEALED COMPOUND HETEROZYGOUS AUTOSOMAL RECESSIVE MUTATIONS IN EXON 4 OF THE SURF1 GENE (NM_003172.2); A PATERNALLY INHERITED HETEROZYGOUS MUTATION, C.269T>C (P.L90P), AND A MATERNALLY INHERITED HETEROZYGOUS MUTATION, C.312_321DEL10INSAT (P.L105X); READS WERE ALIGNED TO HUMAN GENOME BUILD GRCH37/UCSC HG19
Zygosity:  Compound Heterozygous
Other variants:  NEGATIVE FOR FBN1 GENE MUTATION FOUND IN SIBLINGS
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  3 1/2 YEARS
Age at Diagnosis:  4 YEARS, DIAGNOSED BY NEUROLOGIST
In Utero History Information
Birth History Information
Dysmorphic Features
Neurological Symptoms
Seizures
Optical and Audiological Symptoms
Defective hearing
Additional Information:  IMPAIRED HEARING WHICH HAS BEEN IMPROVED WITH EAR TUBES
Musculoskeletal Symptoms
Developmental Milestones
Delayed gross motor skills
Additional Information:  COULD EAT WITH A SPOON OR FORK AT 14-16 MO; BABBLED AT 4-6 MO; PUT TWO WORDS TOGETHER AT 18-20 MO; SMILED IN RESPONSE TO SMILE AT 1-2 MO; PLAYED GAMES LIKE PEEK-A-BOO OR PAT-A-CAKE AT 6-8 MO; POINTED TO INDICATE NEEDS AT 9-11 MO; HAS LOST DEVELOPMENTAL SKILLS OR REGRESSED; GROSS MOTOR DELAYS, LACK OF COORDINATION, IMPAIRED BALANCE, GENERALIZED WEAKNESS
Gastrointestinal Symptoms
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Cognitive and Behavioral Symptoms
Behavioral problems
Learning disability
Additional Information:  SPEECH DELAY
Additional Information
Testing Performed
Neurological Testing:  EEGS REPORTED NORMAL
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Hearing aid
Additional Testing:  ADDITIONAL THERAPY: IEP; HAD A MITO NPV DIET AND FEEDING, BUT CURRENTLY HAS A NORMAL REGULAR DIET; EAR TUBES X3 PLACED
Medications
 CLONAZEPAM (FOR SEIZURES)
Family History
 FAMILY HISTORY IS SIGNIFICANT FOR DILATED AORTIC ROOT, LENS DISLOCATION, CLINICAL DIAGNOSIS OF MARFAN SYNDROME; NO CONSANGUINITY; MOTHER HAS ARTHRITIS, ANXIETY, DEPRESSION, OBESITY; FATHER HAS HIGH BLOOD PRESSURE AND MARFAN SYNDROME; A BROTHER HAS LEIGH SYNDROME, GLOBAL DEVELOPMENTAL DELAYS, INTELLECTUAL DISABILITY, AWKWARD GAIT; A SECOND BROTHER HAS SUSPECTED MARFAN SYNDROME; SISTER HAS LEIGH SYNDROME, GROSS/FINE MOTOR DELAYS, MARFAN SYNDROME; ANOTHER SISTER HAS SUSPECTED MARFAN SYNDROME; YOUNGEST BROTHER AND SISTER ARE HEALTHY; 4 MATERNAL UNCLES, 3 MATERNAL AUNTS, MATERNAL GRANDFATHER AND MATERNAL GRANDMOTHER ARE HEALTHY; 2 PATERNAL AUNTS AND 2 PATERNAL UNCLES HAVE MARFAN SYNDROME; PATERNAL UNCLE AND WIFE STRUGGLED WITH INFERTILITY AND THEIR ONLY CHILD HAS AN ABSENT CEREBELLUM; PATERNAL GRANDFATHER HAS MARFAN SYNDROME AND DIABETES MELLITUS; PATERNAL GRANDMOTHER IS IN GOOD HEALTH; PATERNAL GREAT UNCLE HAS ACUTE MYOCARDIAL INFARCTION AND MARFAN SYNDROME
Remarks See "Phenotypic Data" tab. Clinically affected; has two affected siblings in family 3515: GM28019 (sister) and GM28020 (brother). Carrier parents are GM28022 (mother) and GM28023 (father).

External Links

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Gene Cards MTATP6
SURF1
Gene Ontology GO:0004129 cytochrome-c oxidase activity
GO:0005739 mitochondrion
GO:0005746 mitochondrial electron transport chain
GO:0006118 electron transport
GO:0008535 cytochrome c oxidase biogenesis
GO:0009060 aerobic respiration
GO:0016021 integral to membrane
GO:0019866 inner membrane
NCBI Gene Gene ID:6834
NCBI GTR 185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
OMIM 185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
Omim Description LEIGH SYNDROME
  NECROTIZING ENCEPHALOPATHY, INFANTILE SUBACUTE, OF LEIGH; SNE

Culture Protocols

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Cumulative PDL at Freeze 9.09
Passage Frozen 3
Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Percent O2 3%
Medium Eagles Minimum Essential Medium with Earle's salts:Dulbecco's modified MEM with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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