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GM28020 Fibroblast from Skin, Skin

Description:

LEIGH SYNDROME; LS
MARFAN SYNDROME; MFS
SURFEIT 1; SURF1
FIBRILLIN 1; FBN1

Affected:

Yes

Sex:

Male

Age:

9 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Skin
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Skin
Race White
Ethnicity Not Hispanic/Latino
Ethnicity Dutch
Country of Origin USA
Family Member 4
Family History N
Relation to Proband brother
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks See Phenotypic Data tab. Clinically affected; has two affected siblings in family 3515: GM28019 (sister) and GM28021 (brother). Carrier parents are GM28022 (mother) and GM28023 (father).

Characterizations

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PDL at Freeze 6.95
Passage Frozen 2
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 1 185620.0003; LEIGH SYNDROME
Identified Mutation c.312_321del10insAT (p.Leu105*)
 
Gene FBN1
Chromosomal Location 15q21.1
Allelic Variant 1 p.Glu1366Lys; MARFAN SYNDROME
Identified Mutation c.4096G>A (p.E1366K)
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 2 p.L90P; LEIGH SYNDROME
Identified Mutation c.269T>C (p.L90P)

Phenotypic Data

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Demographic Data
Relation to Proband brother
Age at Sampling 9 YR
Sex Male
Age of Onset(If not a control) 1 YR
Age at Diagnosis(If not a control) 6 YR
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category White
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  POSITIVE FOR FAMILIAL SURF1 MUTATION; WHOLE EXOME SEQUENCING REVEALED COMPOUND HETEROZYGOUS AUTOSOMAL RECESSIVE MUTATIONS IN EXON 4 OF THE SURF1 GENE (NM_003172.2); A PATERNALLY INHERITED HETEROZYGOUS MUTATION, C.269T>C (P.L90P), AND A MATERNALLY INHERITED HETEROZYGOUS MUTATION, C.312_321DEL10INSAT (P.L105X); READS WERE ALIGNED TO HUMAN GENOME BUILD GRCH37/UCSC HG19
Zygosity:  Compound Heterozygous
Other variants:  HETEROZYGOUS LIKELY PATHOGENIC PATERNALLY INHERITED AUTOSOMAL DOMINANT MUTATION IN EXON 34 OF THE FBN1 GENE: C.4096G>A (P.E1366K OR P.GLU1366LYS (GAA>AAA))
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  1 YEAR
Age at Diagnosis:  6 YEARS; DIAGNOSED BY A GENETICIST
In Utero History Information
Birth History Information
Dysmorphic Features
Additional Information:  MARFANOID FEATURES, ABNORMAL BIRTHMARKS; POSTURE: FLAT FEET BILATERALLY
Neurological Symptoms
Additional Information:  ABNORMAL OR AWKWARD GAIT, BALANCE ISSUES, LACK OF COORDINATION, FREQUENT FALLS, SNORING
Optical and Audiological Symptoms
Defective vision
Additional Information:  LENS DISLOCATION, CATARACTS
Musculoskeletal Symptoms
Scoliosis
Additional Information:  JOINT FLEXIBILITY; MUSCLE WEAKNESS
Developmental Milestones
Delayed speech and language development
Global developmental delay
Delayed fine motor skills
Additional Information:  PROFOUND PHONOLOGICAL DISORDER, ARTICULATION DISORDER, APRAXIA OF SPEECH, MIXED RECEPTIVE/EXPRESSIVE LANGUAGE DISORDER; MINIMAL SPONTANEOUS SPEECH MARKED BY EXTREMELY LOW INTELLIGIBILITY, WALKED AT 18 MONTHS OF AGE; DID NOT BABBLE UNTIL PRESSURE EQUALIZATION TUBES WERE PLACED AFTER 12 MONTHS OF AGE, FIRST WORDS AROUND 3 YEARS OF AGE; KNOWS SOME NUMBERS AND COUNTS TO FOUR; RECOGNIZES LETTERS, NUMBERS AND COLORS, THOUGH NOT AGE APPROPRIATE; BEFORE PHYSICAL THERAPY, COULD NOT JUMP, SKIP, OR BALANCE ON 1 LEG; AFTER PHYSICAL THERAPY, CAN JUMP AND DO SINGLE LEG STANCE ACTIVITIES SUCH AS SKIPPING AND GALLOPING; UNABLE TO REPORT SYMPTOMS OF PAIN, OR CAUSE OF PAIN; LEFT HANDED; BED MOBILITY INDEPENDENT; AMBULATION INDEPENDENT
Gastrointestinal Symptoms
Additional Information:  DIARRHEA
Genitourinary Symptoms
Additional Information:  DAYTIME INCONTINENCE
Respiratory and Cardiovascular Symptoms
Additional Information:  RELATED TO MARFAN SYNDROME: DILATED AORTIC ROOT; SIGNIFICANT INCREASE IN AORTIC SINUSES OVER 1 YEAR; ALARMING RATE OF PROGRESSION OF DILATION OF THE SINUSES OF VALSALVA; ECTOPIA LENTIS STATUS POST SURGICAL REPAIR AT AGE 3
Cognitive and Behavioral Symptoms
Intellectual Disability:  Moderate
Additional Information:  INTELLECTUAL DISABILITY, DAY WETTING
Additional Information
Uncategorized Symptoms:  WEIGHT 12TH %ILE, AND HEIGHT 31%ILE BASED ON CDC BOYS 2-20 YEARS
Testing Performed
Musculoskeletal and Developmental Testing:  IMPAIRED FUNCTIONAL MOBILITY, BALANCE, AND ENDURANCE
Respiratory and Cardiovascular Testing:  ABNORMAL ECG - MILD DILATION OF THE AORTA AT THE LEVEL OF THE SINUSES OF VALSALVAL AND AORTIC ROOT
Cognitive and Behavioral Testing:  ABNORMAL BRAIN MRI
Uncategorized Testing:  CHROMOSOME 15Q DELETION
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Orthotics
Communication or learning devices
Additional Testing:  ADDITIONAL TREATMENTS AND ASSISTIVE DEVICES: IEP FOR SPEECH; GLASSES/CONTACTS
Medications
 PROPANOLOL (TO LIMIT PROGRESSION OF AORTIC ENLARGEMENT), MITOCHONDRIAL COCKTAIL (COQ10 (UBIQUINOL), RIBOFLAVIN, CREATINE MONOHYDRATE, ALPHA-LIPOIC ACID, FOLINIC ACID); ATENOLOL, LEUCOVORIN CALCIUM, MULTI-VITAMIN, FIBER GUMMY, PROBIOTIC
Family History
 FAMILY HISTORY IS SIGNIFICANT FOR DILATED AORTIC ROOT, LENS DISLOCATION, CLINICAL DIAGNOSIS OF MARFAN SYNDROME; NO CONSANGUINITY; MOTHER HAS ARTHRITIS, ANXIETY, DEPRESSION, OBESITY; FATHER HAS HIGH BLOOD PRESSURE AND MARFAN SYNDROME; A BROTHER HAS LEIGH SYNDROME, GLOBAL DEVELOPMENTAL DELAYS, TREMORS, INTELLECTUAL DISABILITY, AWKWARD GAIT; A SECOND BROTHER HAS SUSPECTED MARFAN SYNDROME; SISTER HAS LEIGH SYNDROME, GROSS/FINE MOTOR DELAYS, MARFAN SYNDROME; ANOTHER SISTER HAS SUSPECTED MARFAN SYNDROME; YOUNGEST BROTHER AND SISTER ARE HEALTHY; 4 MATERNAL UNCLES, 3 MATERNAL AUNTS, MATERNAL GRANDFATHER AND MATERNAL GRANDMOTHER ARE HEALTHY; 2 PATERNAL AUNTS AND 2 PATERNAL UNCLES HAVE MARFAN SYNDROME; PATERNAL UNCLE AND WIFE STRUGGLED WITH INFERTILITY AND THEIR ONLY CHILD HAS AN ABSENT CEREBELLUM; PATERNAL GRANDFATHER HAS MARFAN SYNDROME AND DIABETES MELLITUS; PATERNAL GRANDMOTHER IS IN GOOD HEALTH; PATERNAL GREAT UNCLE HAS ACUTE MYOCARDIAL INFARCTION AND MARFAN SYNDROME
Remarks See Phenotypic Data tab. Clinically affected; has two affected siblings in family 3515: GM28019 (sister) and GM28021 (brother). Carrier parents are GM28022 (mother) and GM28023 (father).

External Links

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Gene Cards FBN1
MTATP6
SURF1
Gene Ontology GO:0001501 skeletal development
GO:0004129 cytochrome-c oxidase activity
GO:0005201 extracellular matrix structural constituent
GO:0005509 calcium ion binding
GO:0005578 extracellular matrix
GO:0005615 extracellular space
GO:0005739 mitochondrion
GO:0005746 mitochondrial electron transport chain
GO:0006118 electron transport
GO:0007275 development
GO:0007601 visual perception
GO:0008535 cytochrome c oxidase biogenesis
GO:0009060 aerobic respiration
GO:0016021 integral to membrane
GO:0019866 inner membrane
NCBI Gene Gene ID:2200
Gene ID:6834
NCBI GTR 134797 FIBRILLIN 1; FBN1
154700 MARFAN SYNDROME; MFS
185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
OMIM 134797 FIBRILLIN 1; FBN1
154700 MARFAN SYNDROME; MFS
185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
Omim Description LEIGH SYNDROME
  NECROTIZING ENCEPHALOPATHY, INFANTILE SUBACUTE, OF LEIGH; SNE

Culture Protocols

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Cumulative PDL at Freeze 6.95
Passage Frozen 2
Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Percent O2 3%
Medium Eagles Minimum Essential Medium with Earle's salts:Dulbecco's modified MEM with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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