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GM28016 Fibroblast from Skin, Arm

Description:

LEIGH SYNDROME; LS
SURFEIT 1; SURF1

Affected:

Yes

Sex:

Male

Age:

2 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Arm
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Arm
Race White
Ethnicity German
Country of Origin GERMANY
Family Member 1
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks See "Phenotypic Data" Tab.

Characterizations

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PDL at Freeze 6.86
Passage Frozen 2
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 1 p.Gly124Arg; LEIGH SYNDROME
Identified Mutation c.370G>A (p.Gly124Arg)
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 2 c.751+1G>A; LEIGH SYNDROME
Identified Mutation c.751+1G>A

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 2 YR
Sex Male
Age of Onset(If not a control) 11 MO
Age at Diagnosis(If not a control) 18 MO
Racial Category White
Country GERMANY
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  TRIO EXOME SEQUENCING OF BLOOD SAMPLE DNA DETECTED PATHOGENIC COMPOUND HETEROZYGOUS MUTATIONS IN THE SURF1 GENE: PATERNALLY INHERITED C.370G>A (P.GLY124ARG) AND MATERNALLY INHERITED C.751+1G>A (P.?); PARENTS ARE HETEROZYGOUS CARRIERS OF THE VARIANTS
Zygosity:  Compound Heterozygous
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  11 MONTHS
Age at Diagnosis:  DIAGNOSED AT 18 MONTHS OF AGE BY A GENETICIST
In Utero History Information
Birth History Information
Failure to thrive
Dysmorphic Features
Neurological Symptoms
Hypotonia
Additional Information:  MUSCULAR HYPOTONIA
Optical and Audiological Symptoms
Additional Information:  SLIGHT CONVERGENT STRABISMUS; DIRECT PUPILLARY REFLEX AND INDIRECTLY IDENTIFIABLE ON BOTH SIDES
Musculoskeletal Symptoms
Additional Information:  HAIRY LEGS AND ARMS; NEUROMUSCULAR DISEASE
Developmental Milestones
Global developmental delay
Additional Information:  GROWTH DELAY
Gastrointestinal Symptoms
Additional Information:  POOR SUCK; POOR DRINKING; ABDOMINAL SKIN SLIGHTLY MARBLED; SURGERY: PEG (PERCUTANEOUS ENDOSCOPIC GASTROSTOMY) TUBE PLACEMENT
Genitourinary Symptoms
Additional Information:  DOUBLE KIDNEY ON THE RIGHT WITH NO EVIDENCE OF URINARY TRACT DISORDER; LIVER SOMEWHAT ENLARGED; SECONDARY SPLEEN IN THE HILUM AREA; SMALL SCROTUM, PRONOUNCED PRE-PUBIC SWELLING, LEFT HADEN PALPABLE IN SCROTUM, RIGHT HADEN NOT PALPABLE
Respiratory and Cardiovascular Symptoms
Breathing irregularities
Additional Information:  SLIGHTLY STRAINED BREATHING; LUNGS ON THE SAME SIDE WHEN VENTILATED WITH BRONCHOVESICULAR BREATH; THROAT SLIGHTLY RED; TONSILS HYPERPLASTIC ON BOTH SIDES
Cognitive and Behavioral Symptoms
Additional Information
Testing Performed
Respiratory and Cardiovascular Testing:  ECHOCARDIOGRAPHY
Cognitive and Behavioral Testing:  MRI REVEALED FOCAL T2 HYPERINTENSE BASAL GANGLIA LESION, SOME SIGNAL ALTERATIONS, PARTICULARLY IN THE DORSAL MEDULLA OBLONGATA AS WELL AS IN THE PUTAMINA ON BOTH SIDES
Metabolic, Hematologic, and Endocrinologic Testing:  INCREASED SERUM LACTATE; CHLORIDE CONCENTRATION 20/9 MMOL/L WITH SUFFICIENT SWEAT; KAPOOR BLOOD GAS ANALYSIS: PH 7.43, PCO2 18 MMHG, HCO3 11.9 MMOL/L, BE 10.2 MMOL/L, GLUCOSE 103 MG/DL, LACTATE 4.4 MMOL/LMITOCHONDRIAL DISEASE; INITIAL BLOOD GAS ANALYSIS SHOWED CLEAR LACTIC ACIDOSIS WHICH DECREASED UNDER CONTINUOUS INTRAVENOUS FLUID REPLACEMENT; PIERCED LUMBAR PUNCTURE SHOWED NO INCREASED LACTATE
Uncategorized Testing:  DURING EXAM AROUND 1 YEAR OF AGE, BODY WEIGHT: 8KG (<1ST PERCENTILE); BODY LENGTH 80 CM (17TH PERCENTILE); BODY TEMP 36.8C, HEART RATE 128/MIN, OXYTEN SATURATION IN ROOM AIR 100%; ABDOMINAL SONOGRAPHY
Treatments and Assistive Devices
Physical therapy
Orthotics
Medications
 HIGH DOSES OF BIOTIN, THIAMINE, RIBOFLAVIN AND VITAMIN B; TAKING BOTH BIOTIN AND THIAMINE HAS IMPROVED THE MUSCLE TONE
Family History
 TRIO EXOME SEQUENCING REVEALED THAT THE PARENTS ARE HETEROZYGOUS CARRIERS OF THE SURF1 MUTATIONS THAT THIS CHILD HAS; MOTHER, GM28017 (FIBRO), CARRIES THE C.751+1G>A (P.?) MUTATION IN THE SURF1 GENE, AND THAT THE FATHER (NOT IN REPOSITORY) CARRIES THE C.370G>A (P.GLY124ARG) MUTATION.
Remarks See "Phenotypic Data" Tab.

External Links

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Gene Cards MTATP6
SURF1
Gene Ontology GO:0004129 cytochrome-c oxidase activity
GO:0005739 mitochondrion
GO:0005746 mitochondrial electron transport chain
GO:0006118 electron transport
GO:0008535 cytochrome c oxidase biogenesis
GO:0009060 aerobic respiration
GO:0016021 integral to membrane
GO:0019866 inner membrane
NCBI Gene Gene ID:6834
NCBI GTR 185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
OMIM 185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
Omim Description LEIGH SYNDROME
  NECROTIZING ENCEPHALOPATHY, INFANTILE SUBACUTE, OF LEIGH; SNE

Culture Protocols

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Cumulative PDL at Freeze 6.86
Passage Frozen 2
Split Ratio 1:6
Temperature 37 C
Percent CO2 5%
Percent O2 3%
Medium Eagles Minimum Essential Medium with Earle's salts:Dulbecco's modified MEM with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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