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GM28012 Fibroblast from Skin, Arm

Description:

LEIGH SYNDROME; LS
SURFEIT 1; SURF1

Affected:

Yes

Sex:

Female

Age:

4 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Arm
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Arm
Race White
Ethnicity Not Hispanic/Latino
Ethnicity Lebanese, Irish, English, American Indian, French
Country of Origin USA
Family Member 1
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks See "Phenotypic Data" tab; unaffected carrier mother with mutation in SURF1 is GM28011.

Characterizations

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PDL at Freeze 6.39
Passage Frozen 2
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 1 185620.0003; LEIGH SYNDROME
Identified Mutation c.312_321del10insAT (p.Leu105*)
 
Gene SURF1
Chromosomal Location 9q34.2
Allelic Variant 2 p.Arg192Profs*8; LEIGH SYNDROME
Identified Mutation c.574_575insCTGC (p.Arg192Profs*8)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 4 YR
Sex Female
Age of Onset(If not a control) 6 MO
Age at Diagnosis(If not a control) 20 MO
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category White
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  WHOLE EXOME SEQUENCING (WES) REVEALED THAT DONOR HAS PATHOGENIC COMPOUND HETEROZYGOUS MUTATIONS IN THE SURF1 GENE: C.312_321DEL10INSAT (P.L105X) AND C.574_575INSCTGC (P.R192PFSX8); READS WERE ALIGNED TO HUMAN GENOME BUILD GRCH37/UCSC HG19
Zygosity:  Compound Heterozygous
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  6 MONTHS
Age at Diagnosis:  20 MONTHS
In Utero History Information
Additional Information:  PRE-ECLAMPSIA
Birth History Information
Failure to thrive
Caesarian section
Additional Information:  BORN AT 38 WEEKS; REQUIRED BAGGING AND INTUBATION; HAD TENSION PNEUMOTHORAX AND REQUIRED CHEST TUBE; FEEDING DIFFICULTIES; DYSPHAGIA AND POOR WEIGHT GAIN AT ABOUT 5-6 MONTHS OF AGE (NORMAL PRIOR TO THAT); POOR WEIGHT GAIN; MET MILESTONES DESPITE HYPOTONIA; REGRESSIVE EPISODE AT 3 YEARS
Dysmorphic Features
Coarse facies
Additional Information:  MILDLY COURSE FACIAL FEATURES
Neurological Symptoms
Hypotonia
Additional Information:  MILD TRUNCAL WEAKNESS; HYPOVENTILATORY CHEST (ENDOTRACHEAL TUBE PLACED)
Optical and Audiological Symptoms
Nystagmus
Musculoskeletal Symptoms
Additional Information:  SHORT STATURE
Developmental Milestones
Additional Information:  DEVELOPMENTAL NEUROMOTOR REGRESSION
Gastrointestinal Symptoms
Eating difficulties
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Additional Information:  CHRONIC RESPIRATORY FAILURE
Cognitive and Behavioral Symptoms
Additional Information:  DYSARTHRIC, CAN SIT ALONE AND WALK WITH GAIT TRAINER
Additional Information
Testing Performed
Neurological Testing:  MRI, EKG, CEEG (TO CHECK FOR SEIZURES); MRI SHOWED MULTIFOCAL SMALL FOCI OF REDUCED DIFFFUSIVITY SYMMETRICALLY IN THE CENTRUM SEMIOVAL, BRAIN STEM AND CEREBELLUM CONSISTENT WITH LEIGH SYNDROME
Cognitive and Behavioral Testing:  MRI: DEMYELINATION, PUNCTATE LESIONS
Metabolic, Hematologic, and Endocrinologic Testing:  MILDLY ELEVATED LACTATE; TSH, T4, CORTISOL, AMMONIA, BHB; INDIRECT CALORIMETRY TO GUIDE NUTRITION
Uncategorized Testing:  PRIOR HOSPITALIZATION DUE TO RESPIRATORY DISTRESS SECONDARY TO RHINO/ENTEROVIRUS INFECTION
Treatments and Assistive Devices
Speech therapy
Wheelchair or ambulation devices
Orthotics
Additional Testing:  SURGERY: TRACHEOSTOMY, G-TUBE PLACEMENT; SUPPORT: BIPAP DURING SLEEP
Medications
 MITO COCKTAIL; PRIOR MEDS: KEPPRA, CLONIDINE
Family History
 PARENTS ARE CARRIERS; WES AND VARIANT SEGREGATION ANALYSIS REVEALED AUTOSOMAL RECESSIVE INHERITANCE FOR MUTATIONS IN THE SURF1 GENE: C.312_321DEL10INSAT (P.L105X) IS INHERITED FROM THE MOTHER AND C.574_575INSCTGC IS INHERITED FROM THE FATHER.
Remarks See "Phenotypic Data" tab; unaffected carrier mother with mutation in SURF1 is GM28011.

External Links

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Gene Cards MTATP6
SURF1
Gene Ontology GO:0004129 cytochrome-c oxidase activity
GO:0005739 mitochondrion
GO:0005746 mitochondrial electron transport chain
GO:0006118 electron transport
GO:0008535 cytochrome c oxidase biogenesis
GO:0009060 aerobic respiration
GO:0016021 integral to membrane
GO:0019866 inner membrane
NCBI Gene Gene ID:6834
NCBI GTR 185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
OMIM 185620 SURFEIT 1; SURF1
256000 LEIGH SYNDROME; LS
Omim Description LEIGH SYNDROME
  NECROTIZING ENCEPHALOPATHY, INFANTILE SUBACUTE, OF LEIGH; SNE

Culture Protocols

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Cumulative PDL at Freeze 6.39
Passage Frozen 2
Split Ratio 1:5
Temperature 37 C
Percent CO2 5%
Percent O2 3%
Medium Eagles Minimum Essential Medium with Earle's salts:Dulbecco's modified MEM with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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