Coriell Institute for Medical Research
Coriell Institute of Medical Research
  • Request a Quote
  • Donate
  • Login
  • View Cart
Sample Catalog | Custom Services | Core Facilities | Genomic Data Search
  • Biobank
    • NIGMS
    • NINDS
    • NIA
    • NHGRI
    • NEI
    • Allen Cell Collection
    • Rett Syndrome iPSC Collection
    • Autism Research Resource
    • HD Community Biorepository
    • CDC Cell and DNA
    • J. Craig Venter Institute
    • Orphan Disease Center Collection
    • All Biobanks
  • Research
    • Overview
    • Meet Our Scientists
      • Our Faculty
      • Our Scientific Staff
    • Camden Cancer Research Center
    • Epigenetic Therapies SPORE
    • Core Facilities
    • Epigenomics
    • Camden Opioid Research Initiative (CORI)
    • The Issa & Jelinek Lab
    • The Jian Huang Lab
    • The Luke Chen Lab
      • The Lab
      • The Team
      • Publications
    • The Scheinfeldt Lab
    • The Shumei Song Lab
    • The Nora Engel Lab
      • The Lab
      • The Team
      • Publications
    • Publications
  • Services
    • Overview
    • Biobanking Services
      • Core Services
      • Project Management
      • Research Support Services
      • Sample Cataloging
      • Sample Collection Kits
      • Sample Data Management
      • Sample Distribution
      • Sample Management
      • Sample Procurement
      • Sample Storage
    • Bioinformatics and Biostatistics Services
    • Cellular and Molecular Services
      • Biomarker Research Solutions
      • Cell Culture
      • Nucleic Acid Isolation and Quality Control
    • Clinical Trial Support
      • Overview
      • Sample Collection
      • Data Management
      • Sample Processing and QC
      • Storage and Distribution
      • Biomarker Services
      • Data Analaysis
    • Core Facilties
      • Overview
      • Animal and Xenograft
      • Bioinformatics and Biostatistics
      • Cell Imaging
      • CRISPR Gene Engineering
      • Flow Cytometry and Cell Sorting
      • Genomics and Epigenomics
      • iPSC - Induced Pluripotent Stem Cells
      • Organoids
    • Coriell Marketplace
    • Genomic, Epigenomic and Multiomics Services
    • Stem Cells and iPSC Services
      • Core Services
      • Reprogramming
      • Characterization and Quality Control
      • Differentiated Cell Lines
      • iPSC-Derived Organoids
      • iPSC Expansion
      • iPSC Gene Editing
  • Ordering
    • Stem Cells
    • Cell Lines
    • DNA and RNA
    • Featured Products
      • FFPE
      • HMW DNA
    • Genomic Data Search
    • Search by Catalog ID
    • Help
      • Create Account
      • Order Online
      • Ordering FAQ
      • FAQs/Culture Instructions
      • Reference Materials
        • Biobanks
        • NIGMS Repository
        • NHGRI Repository
        • NINDS Repository
        • NIA Repository
        • NIST
        • GeT-RM
      • Secondary Distribution Policies
      • MTA Assurance Form
      • Shipment Policy
      • Contact Customer Service
  • About Us
    • Our History
    • Meet Our Team
    • Meet Our Board
    • Education
      • Science Fair
      • Summer Experience
      • Outreach
      • Research Program Internship
    • Press Room
      • Press Releases
      • Coriell Blog
      • Annual Report
    • Careers
      • Working at Coriell
    • Giving
      • Donate
      • Giving FAQ
    • Contact Us
    • Legal Notice
  • Login View Cart
search submit
GM27900 LCL from B-Lymphocyte

Description:

VICI SYNDROME; VICIS
ECTOPIC P-GRANULES AUTOPHAGY PROTEIN 5, C. ELEGANS, HOMOLOG OF; EPG5

Affected:

Yes

Sex:

Female

Age:

4 MO (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

back to top
Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Ethnicity Italian, Scottish, Welsh
Country of Origin USA
Family Member 1
Family History N
Relation to Proband proband
Species Homo sapiens
Common Name Human
Remarks See Phenotypic Data tab. Fibro is GM27898.

Characterizations

back to top
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by LINE assay
 
Gene EPG5
Chromosomal Location 18q12.3-q21.1
Allelic Variant 1 p.Leu1067Tyrfs*10; VICI SYNDROME; VICIS
Identified Mutation c.3200del (p.Leu1067TyrfsTer10)
 
Gene EPG5
Chromosomal Location 18q12.3-q21.1
Allelic Variant 2 p.Trp865*; VICI SYNDROME; VICIS
Identified Mutation c.2595G>A (p.Trp865Ter)

Phenotypic Data

back to top
Demographic Data
Relation to Proband proband
Age at Sampling 4 MO
Sex Female
Age of Onset(If not a control) 5 WK
Age at Diagnosis(If not a control) 3 MO
Racial Category White
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  NGS EXOME SEQUENCING: COMPOUND HETEROZYGOUS FOR TWO PATHOGENIC VARIANTS IN THE EPG5 GENE: C.3200DEL (P.LEU1067TYRFSTER10) AND C.2595G>A (P.TRP865TER)
Zygosity:  Heterozygous
Notes: NO REPORTABLE VARIANTS IN ADA2 WHICH IS ASSOCIATED WITH VACULITIS, AUTOINFLAMMATION, IMMUNODEFICIENCY AND HEMATOLOGIC DEFECTS SYNDROME
Other variants:  LIKELY PATHOGENIC VARIANT IN ITCH C.337+2T>C WHICH CONFERS A CARRIER STATUS FOR AUTOSOMAL RECESSIVE MULTISYSTEM AUTOIMMUNE DISEASE
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  5 WEEKS
Age at Diagnosis:  DIAGNOSED AT 2.5 MONTHS BY A GENETICIST AND GENETIC COUNSELOR
In Utero History Information
Additional Information:  PREGNANCY COMPLICATED WITH GESTATIONAL DIABETES; MOTHER TOOK HUMIRA DURING 1ST TRIMESTER, FETAL MRI AT 32 WEEKS GESTATION NOTED AGENESIS OF THE CORPUS COLLOSUM
Birth History Information
Failure to thrive
Caesarian section
Additional Information:  DELIVERED BY EMERGENCY C-SECTION AT 38.5 WEEKS DUE TO DECELS, FEEDING DIFFICULTIES IN INFANCY; EPISODIC AND UNEXPLAINED FEVERS; AT 7 WEEKS: HEIGHT/LENGTH - 0.00%ILE (WHO), WEIGHT - 1.63%ILE (CDC), HEAD CIRCUMFERENCE - 1.15%ILE (CDC)
Dysmorphic Features
Additional Information:  HYPOPIGMENTATION
Neurological Symptoms
Corpus callosum abnormalities
Optical and Audiological Symptoms
Additional Information:  AGENESIS OF CORPUS CALLOSUM
Musculoskeletal Symptoms
Additional Information:  CORTICAL IRREGULARITY
Developmental Milestones
Gastrointestinal Symptoms
Additional Information:  NASOGASTRIC (NG) AND ORAL (PO) FEEDING WITH NUTRAMIGEN; DECREASED LIVER FUNCTION, DIARRHEA
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Additional Information:  CONGENITAL HEART DISEASE PRESENTING WITH FEVER, TRICUSPID REGURGITATION, VENTRICULAR HYPERTROPHY; CORONARY ANEURYSM
Cognitive and Behavioral Symptoms
Additional Information
Testing Performed
Neurological Testing:  BRAIN AND WHOLE BODY MRI
Respiratory and Cardiovascular Testing:  ECG (ECHOCARDIOGRAM)
Metabolic, Hematologic, and Endocrinologic Testing:  HYPERTRIGLYCERIDEMIA, SERUM FERRITIN, PANCYTOPENIA
Uncategorized Testing:  INCREASED CRP, ESR, CK WITH FEVER
Treatments and Assistive Devices
Additional Testing:  G-J TUBE PLACEMENT
Medications
 OMEPRAZOLE
Family History
 MATERNAL GRANDFATHER HAS HYPERLIPIDEMIA; AUNT DIAGNOSED AT 3 YEARS WITH RHEUM ISSUES; MOTHER HAS RHEUM-RELATED SEIZURES, DIAGNOSED AT 2 YEARS WITH LUPUS
Remarks See Phenotypic Data tab. Fibro is GM27898.

External Links

back to top
Gene Cards EPG5
NCBI GTR 242840 VICI SYNDROME; VICIS
615068 ECTOPIC P-GRANULES AUTOPHAGY PROTEIN 5 HOMOLOG; EPG5
OMIM 242840 VICI SYNDROME; VICIS
615068 ECTOPIC P-GRANULES AUTOPHAGY PROTEIN 5 HOMOLOG; EPG5
Omim Description IMMUNODEFICIENCY WITH CLEFT LIP/PALATE, CATARACT, HYPOPIGMENTATION,AND ABSENT CORPUS CALLOSUM

Culture Protocols

back to top
Split Ratio 1:4
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
Add to Cart
How to Order
  • Ordering Instructions
  • MTA / Assurance Form
  • Statement of Research Intent Form
Related Products
Same Family
  • 3495
Miscellaneous
  • DNA on Demand
  • Custom Services

Our mission is to prevent and cure disease through biomedical research.

CONTACT US

CUSTOMER SERVICE
customerservice@coriell.org (800) 752-3805 • (856) 757-4848
Subscribe to our newsletter here

Coriell Institute for Medical Research
403 Haddon Avenue Camden, NJ 08103, USA (856) 966-7377

Ⓒ 2025 Coriell Institute. All rights reserved.

  • Facebook
  • Linkedin
  • Youtube