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GM27851 Fibroblast from Skin, Skin

Description:

RETT SYNDROME, CONGENITAL VARIANT
FORKHEAD BOX G1; FOXG1

Affected:

Yes

Sex:

Female

Age:

3 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
FOXG1
Biopsy Source Skin
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Skin
Race White
Ethnicity Spanish
Country of Origin SPAIN
Family Member 1
Family History N
Relation to Proband proband
Species Homo sapiens
Common Name Human
Remarks See Phenotypic Data tab; lymph is GM27852; unaffected parents: mother is GM27853 (lymph), father is GM27864 (lymph).

Characterizations

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PDL at Freeze 6.52
Passage Frozen 3
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by LINE assay
 
Gene FOXG1
Chromosomal Location 14q12
Allelic Variant 1 Gly>Ala; RETT SYNDROME, CONGENITAL VARIANT
Identified Mutation c.506delG (p.Gly169Alafs*23)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 3 YR
Sex Female
Racial Category White
Country SPAIN
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  NGS PANEL TESTING REVEALED A DE NOVO HETEROZYGOUS PATHOGENIC DE NOVO VARIANT IN FOXG1 GENE: C.506DELG (P.GLY169ALAFS*23)
Zygosity:  Heterozygous
Age of Symptom Onset and Age at Diagnosis
In Utero History Information
Intrauterine growth restriction
Additional Information:  IUGR SINCE 20TH WEEK, SUSPICIOUS OF CORPUS CALLOSUM HYPOPLASIA
Birth History Information
Additional Information:  VAGINAL DELIVERY AT WEEK 37 WITHOUT COMPLICATIONS; APGAR 9/9 WITHT AT BIRTH: 3360 G (P90, 1.31 SD) LENGTH 49 CM (P71, 0.57 SD), CC: 34 CM (P65, 0.39 SD)
Dysmorphic Features
Strabismus
Microcephaly
Additional Information:  CONVERGENT STRABISMUS; THIN LIPS
Neurological Symptoms
Cerebral palsy
Hypotonia
Additional Information:  DYSKINETIC CEREBRAL PALSY; POSTERIOR TRUNK HYPERTRICHOSIS, DISTAL FLUCTUANT TONE, DORSAL KYPHOSIS WHEN SEATED
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Developmental Milestones
Global developmental delay
Sitting Without Assistance:  Not achieved and not maintained
Additional Information:  PSYCHOMOTOR DEVELOPMENT AT 3 YEARS OF AGE; INCOMPLETE HEAD CONTROL
Gastrointestinal Symptoms
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Cognitive and Behavioral Symptoms
Additional Information:  FOCAL CRISIS AND DYSTONIC-DYSKINETIC NON-EPILEPTIC PAROXYSMAL EVENTS
Additional Information
Testing Performed
Neurological Testing:  CEREBRAL MRI: LOSS OF SUPRATENTORIAL WHITE MATTER AND CORTICAL BILATERAL PARIETAL-TEMPROAL-OCCIPITAL ALTERATIONS WITH FEATURES RESEMBLING PACHYGYRIA
Optical and Audiological Testing:  ENT: NORMAL AUDITORY EVOKED POTENTIALS AND OTOACOUSTIC EMISSIONS
Cognitive and Behavioral Testing:  EEG: NO EPILEPTIFORM ACTIVITY
Metabolic, Hematologic, and Endocrinologic Testing:  METABOLIC: NORMAL AMINO ACIDS ORGANIC ACIDS (SERUM, CSF, URINE)
Uncategorized Testing:  BMI: 10 KG/M2; CGH ARRAYS: NORMAL; PCR FOR CMV DETECTION (DRY BLOOD, NEONATAL SCREEN) NEGATIVE
Treatments and Assistive Devices
Medications
 LEVETIRACETAM, LACOSAMIDE, VITAMIN3 D3, PIRIDOXINE
Family History
 NON-CONSANGUINEOUS PARENTS; NGS REVEALED THAT NEITHER PARENT HAS THE FOXG1 VARIANT.
Remarks See Phenotypic Data tab; lymph is GM27852; unaffected parents: mother is GM27853 (lymph), father is GM27864 (lymph).

External Links

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Gene Cards FOXG1
Gene Ontology GO:0003700 transcription factor activity
GO:0005634 nucleus
GO:0006355 regulation of transcription, DNA-dependent
GO:0007420 brain development
GO:0009653 morphogenesis
NCBI Gene Gene ID:2290
NCBI GTR 164874 FORKHEAD BOX G1; FOXG1
613454 RETT SYNDROME, CONGENITAL VARIANT
OMIM 164874 FORKHEAD BOX G1; FOXG1
613454 RETT SYNDROME, CONGENITAL VARIANT

Culture Protocols

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Cumulative PDL at Freeze 6.52
Passage Frozen 3
Split Ratio 1:7
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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