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GM27638 LCL from B-Lymphocyte

Description:

MENTAL RETARDATION, AUTOSOMAL DOMINANT 40; MRD40
CHROMOSOME ALIGNMENT-MAINTAINING PHOSPHOPROTEIN 1; CHAMP1

Affected:

Yes

Sex:

Female

Age:

3 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race Black/African American
Ethnicity Not Hispanic/Latino
Country of Origin USA
Family Member 1
Family History N
Relation to Proband proband
Species Homo sapiens
Common Name Human
Remarks See Phenotypic Data tab.

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by LINE assay
 
Gene CHAMP1
Chromosomal Location 13q34
Allelic Variant 1 p.Tyr709Ter; MENTAL RETARDATION, AUTOSOMAL DOMINANT 40; MRD40
Identified Mutation c.2127T>G (p.Tyr709*)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 3 YR
Sex Female
Age of Onset(If not a control) 4 MO
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category Black/African American
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  HETEROZYGOUS AUTOSOMAL DOMINANT MUTATION IN THE CHAMP1 GENE: C.2127T>G (P.TYR709TER)
Zygosity:  Heterozygous
Notes: DE NOVO MUTATION (VARIANT NOT DETECTED IN EITHER PARENT)
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  4 MONTHS
Age at Diagnosis:  DIAGNOSED BY GENETICIST AND PRIMARY CARE PHYSICIAN
In Utero History Information
Birth History Information
Dysmorphic Features
Microcephaly
Additional Information:  DYSMORPHIC FACIAL FEATURES
Neurological Symptoms
Additional Information:  ABNORMAL SHAKING AND MOVEMENT
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Developmental Milestones
Global developmental delay
Additional Information:  NON-VERBAL - LIMITED WORDS; DEVELOPMENT IS SIMILAR TO THAT OF AN 18 MONTH OLD; BALANCE ISSUES; FEEDING PROBLEMS - FOOD NEEDS TO BE DICED
Gastrointestinal Symptoms
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Cognitive and Behavioral Symptoms
Additional Information
Testing Performed
Neurological Testing:  EEG, MRI
Respiratory and Cardiovascular Testing:  EKG
Uncategorized Testing:  BIOPSY
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Communication or learning devices
Additional Testing:  PECS BOOK
Medications
Family History
 NONE; MUTATION NOT DETECTED IN EITHER PARENT (LYMPHS: GM27639, GM27640)
Remarks See Phenotypic Data tab.

Publications

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Yoshizaki Y, Ouchi Y, Kurniawan D, Yumoto E, Yoneyama Y, Rizqullah FR, Sato H, Sarholz MH, Natsume T, Kanemaki MT, Ikeda M, Ui A, Iemura K, Tanaka K, CHAMP1 premature termination codon mutations found in individuals with intellectual disability cause a homologous recombination defect through haploinsufficiency Scientific reports14:31904 2024
PubMed ID: 39738383

External Links

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Gene Cards CHAMP1
NCBI GTR 616327 CHROMOSOME ALIGNMENT-MAINTAINING PHOSPHOPROTEIN 1; CHAMP1
616579 MENTAL RETARDATION, AUTOSOMAL DOMINANT 40; MRD40
OMIM 616327 CHROMOSOME ALIGNMENT-MAINTAINING PHOSPHOPROTEIN 1; CHAMP1
616579 MENTAL RETARDATION, AUTOSOMAL DOMINANT 40; MRD40

Culture Protocols

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Split Ratio 1:6
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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How to Order
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