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GM22010 LCL from B-Lymphocyte

Description:

PROPIONIC ACIDEMIA
PROPIONYL-COA CARBOXYLASE, ALPHA SUBUNIT; PCCA

Affected:

Yes

Sex:

Male

Age:

7 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Ethnicity Not Hispanic/Latino
Family Member 1
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected; diagnosed in first week of life; no family history of PA; acute pancreatitis; normal gut motility; G-tube for 100% of feeding; vomitting at least once a week; had seizures only during birth crisis; chronic neutropenia; immune deficiency; first walked at 20 months of age; uses assisting language technology; moderately impaired cognitive ability; IQ of 41; chronic hyperammonemia (<2 times normal); currently on metabolic formula and levocarnitine; donor subject is homozygous for a G216fs mutation in exon 8 of the PCCA gene

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin confirmed by LINE assay
 
Gene PCCA
Chromosomal Location 13q32
Allelic Variant 1 ; PROPIONIC ACIDEMIA
Identified Mutation G216fs
 
Gene PCCA
Chromosomal Location 13q32
Allelic Variant 2 ; PROPIONIC ACIDEMIA
Identified Mutation G216fs

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 7 YR
Sex Male
Age of Onset(If not a control) 1 WK
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category White
 
Data Elements
Clinical Element Type: Propionic Acidemia
  (Baseline)
Neonatal Data
Was this child newborn screened? yes  no   unknown 
If yes, was the result prior to hospitalization  No Data
Weight at birth in kgs  4.025
Length at birth in cm  55
Was child breast-fed? yes  no   unknown 
Failure to thrive? yes  no   unknown 
Molecular/Enzyme Laboratory Test Results
Which Gene: PCCA? yes   no  unknown 
Which Gene: PCCB? yes  no   unknown 
Mutations Allele 1  G216FS
Mutations Allele 2  G216FS
Enzyme activity - % of normal  0
Absolute amount  NOT DETECTABLE
Family History
Are there other family members with PA? yes  no   unknown 
Other affected relatives? yes  no   unknown 
Has the individual passed away?  No Data
Clinical Evaluation
Current weight in kgs  30.2
Current height in cms  120
Respiratory
Apnea yes  no   unknown 
Tachypnea yes  no   unknown 
Cardiovascular
Cardiomyopathy yes  no   unknown 
Long QT? yes  no   unknown 
If yes, type  No Data
Abdominal/Gastrointestinal
Pancreatitis chronic  acute   never noted 
Kidney problems yes  no   unknown 
Liver transplant yes  no   unknown 
Port-a-cath currently in place  not currently in place  never had one  
Gut motility normal   slow  requires medication  unknown 
Reflux yes  no   unknown 
Eating by mouth  0%
Tube fed yes   no  unknown 
If yes, what kind  G-tube
Vomiting  once a week or more
Are anti-emetics used for vomiting yes   no  unknown 
List medications  ZOFRAN
Neurologic
Basal ganglia damage yes  no  unknown  
If yes, determined by  No Data
Seizures yes   no  unknown 
If yes, type and frequency  SEIZURES AT BIRTH CRISIS ONLY
Autism spectrum disorder yes  no   unknown 
ADD/ADHD yes  no   unknown 
Optic nerve damage yes  no  unknown  
Neutropenia chronic   acute  unknown 
Anemia yes  no   unknown 
Immune deficiency yes   no  unknown 
Treated with IVIG yes  no   unknown 
Low platelets chronic  acute  not applicable   unknown 
Asthma yes  no   unknown 
Secondary hip dysplasia yes  no   unknown 
Broken bones yes  no   unknown 
Short stature yes  no   unknown 
Growth hormone treatment yes  no   unknown 
Osteoporosis yes  no   unknown 
Developmental Evaluation
Walking  100% of the time
Age when first walked  20 MONTHS
Language  uses assistive technology (device, PECS or sign)
Congitive ability  moderately impaired
IQ known   untested  unsure 
If known, give value or age level  41
Metabolic
Is the individual biotin responsive yes  no   unknown 
Episodes of ketoacidosis yes  no  unknown  
Chronic hyperammonemia yes   no  unknown 
Currently elevated  <2 times normal
Is the individual currently on metabolic formula yes   no  unknown 
If yes, which ones SHS XMTVI
PFD
Is the individual taking levocarnitine yes   no  unknown 
Other supllements Co-Q10
DHA
Vitamin E
Biotin
Remarks Clinically affected; diagnosed in first week of life; no family history of PA; acute pancreatitis; normal gut motility; G-tube for 100% of feeding; vomitting at least once a week; had seizures only during birth crisis; chronic neutropenia; immune deficiency; first walked at 20 months of age; uses assisting language technology; moderately impaired cognitive ability; IQ of 41; chronic hyperammonemia (<2 times normal); currently on metabolic formula and levocarnitine; donor subject is homozygous for a G216fs mutation in exon 8 of the PCCA gene

Publications

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Thomas SP, Denu JM, Short-chain fatty acids activate acetyltransferase p300 eLife10: 2021
PubMed ID: 34677127

External Links

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Gene Cards PCCA
Gene Ontology GO:0004658 propionyl-CoA carboxylase activity
GO:0005524 ATP binding
GO:0005739 mitochondrion
GO:0006631 fatty acid metabolism
GO:0008152 metabolism
GO:0009374 biotin binding
GO:0016874 ligase activity
GEO GEO Accession No: GSM1050439
GEO Accession No: GSM1050440
NCBI Gene Gene ID:5095
NCBI GTR 232000 PROPIONYL-CoA CARBOXYLASE, ALPHA SUBUNIT; PCCA
606054 PROPIONIC ACIDEMIA
OMIM 232000 PROPIONYL-CoA CARBOXYLASE, ALPHA SUBUNIT; PCCA
606054 PROPIONIC ACIDEMIA
Omim Description PROPIONIC ACIDEMIA

Culture Protocols

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Split Ratio 1:2
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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