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GM21645 Fibroblast from Skin, Unspecified

Description:

CEREBROOCULOFACIOSKELETAL SYNDROME 4; COFS4
EXCISION-REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HANSTER, 1; ERCC1

Affected:

No

Sex:

Male

Age:

No Data

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Biopsy Source Unspecified
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Unspecified
Race White
Ethnicity ITALIAN
Family Member 3
Relation to Proband father
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically normal father of an affected son; donor subject is heterozygous for a C>G transversion at nucleotide 839 in exon 7 of the ERCC1 gene (839C>G) resulting in the subsitution of leucine for phenylalanine at codon 231 [Phe231Leu (F231L)]; proband is not in Repository

Characterizations

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Passage Frozen 9
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin confirmed by LINE assay
 
Gene ERCC1
Chromosomal Location 19q13.2-q13.3
Allelic Variant 1 126380.0002; CEREBROOCULOFACIOSKELETAL SYNDROME 4
Identified Mutation PHE231LEU; In an infant with a severe and developmental disorder compatible with the diagnosis of cerebrooculofacioskeletal syndrome (COFS4; 610758), Jaspers et al. (Am J Hum Genet 80:457-466,2007) found compound heterozygosity for 2 mutations in the ERCC1 gene: a C-to-T transition predicted to convert codon gln158 into an amber translational stop signal (CAG to TAG; Q158X), inherited from the mother; inherited from the father, a C-to-G transversion which was predicted to change phe231 to leucine (F231L). The allele derived from the mother encoded a truncated polypeptide that lacked the entire C-terminal domain, which is essential for interaction with XPF. Heterodimerization of ERCC1-XPF is required for stability of the complex and for its endonuclease activity. Therefore, the Q158X allele was expected to be functionally null.

Phenotypic Data

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Remarks Clinically normal father of an affected son; donor subject is heterozygous for a C>G transversion at nucleotide 839 in exon 7 of the ERCC1 gene (839C>G) resulting in the subsitution of leucine for phenylalanine at codon 231 [Phe231Leu (F231L)]; proband is not in Repository

External Links

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Gene Cards ERCC1
Gene Ontology GO:0003684 damaged DNA binding
GO:0004519 endonuclease activity
GO:0004520 endodeoxyribonuclease activity
GO:0005634 nucleus
GO:0006281 DNA repair
GO:0006289 nucleotide-excision repair
GO:0009653 morphogenesis
GO:0016787 hydrolase activity
NCBI Gene Gene ID:2067
NCBI GTR 126380 EXCISION REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HAMSTER, 1; ERCC1
610758 CEREBROOCULOFACIOSKELETAL SYNDROME 4; COFS4
OMIM 126380 EXCISION REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HAMSTER, 1; ERCC1
610758 CEREBROOCULOFACIOSKELETAL SYNDROME 4; COFS4
Omim Description CEREBROOCULOFACIOSKELETAL SYNDROME 4; COFS4

Culture Protocols

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Passage Frozen 9
Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Medium Ham's F10 with 2mM L-glutamine or equivalent
Serum 10% fetal bovine serum Not inactivated
Substrate None specified
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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