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GM20100 Fibroblast from Skin, Unspecified

Description:

CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ig
DOLICHYL-P-MANNOSE:MAN-7-GlcNAc-2-PP-DOLICHYL-ALPHA-6-MANNOSYLTRANSFERASE

Affected:

Yes

Sex:

Male

Age:

No Data

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Other Disorders of Known Biochemistry
Biopsy Source Unspecified
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Sample Source Fibroblast from Skin, Unspecified
Relation to Proband proband
Species Homo sapiens
Common Name Human
Remarks Clinically affected; delivered at 31 weeks gestation due to gestational diabetes; birth weight 2296 g (>95th percentile); poor sucking and inadequate temperature regulation noted at birth; micropenis; bilateral epicanthal folds; widespread, flat nipples; hypotonia; global developmental delay (crawled at 2 years, walked unassisted at 5 years, virtually no speech development until 5 years and subsequently developed a few words); pronounced cerebellar hypoplasia/atrophy noted at age 4 years; ambulates slowly with wide-based gait for short distances; failure to thrive; growth retardation; gastroesophageal reflux; 3 episodes of pneumonia during first year of life; recurrent otitis media; deficient total IgG with the deficiency confined to subclass IgG1; low total cholesterol and LDL, antithrombin-III, factor XIa, protein C, and hypoalbuminemia; normal protein S; normal to high liver transaminases; carbohydrate deficient transferrin assayed by electrospray ionization mass spectrometry was abnormal: 1 chain/2 chains ratio = 1.246 (normal < or = to 0.074) and 0 chains/2 chains ratio = 0.033 (normal < or = to 0.022); donor subject is a compound heterozygote: one allele has a T>G transversion at nucleotide 688 in exon 5 of the ALG12 gene [688T>G] resulting in a substitution of aspartic acid for tyrosine at codon 230 [Tyr230Asp(Y230D)] and a second allele has a C>T transition at nucleotide 931 in exon 6 of the ALG12 gene [931C>T] resulting in a substitution of cysteine for arginine at codon 311 [Arg311Cys(R311C)].

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin confirmed by LINE assay
 
Gene ALG12
Chromosomal Location 22q13.33
Allelic Variant 1 Y230D; CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ig
Identified Mutation TYR230ASP
 
Gene ALG12
Chromosomal Location 22q13.33
Allelic Variant 2 R311C; CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ig
Identified Mutation ARG311CYS

Phenotypic Data

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Remarks Clinically affected; delivered at 31 weeks gestation due to gestational diabetes; birth weight 2296 g (>95th percentile); poor sucking and inadequate temperature regulation noted at birth; micropenis; bilateral epicanthal folds; widespread, flat nipples; hypotonia; global developmental delay (crawled at 2 years, walked unassisted at 5 years, virtually no speech development until 5 years and subsequently developed a few words); pronounced cerebellar hypoplasia/atrophy noted at age 4 years; ambulates slowly with wide-based gait for short distances; failure to thrive; growth retardation; gastroesophageal reflux; 3 episodes of pneumonia during first year of life; recurrent otitis media; deficient total IgG with the deficiency confined to subclass IgG1; low total cholesterol and LDL, antithrombin-III, factor XIa, protein C, and hypoalbuminemia; normal protein S; normal to high liver transaminases; carbohydrate deficient transferrin assayed by electrospray ionization mass spectrometry was abnormal: 1 chain/2 chains ratio = 1.246 (normal < or = to 0.074) and 0 chains/2 chains ratio = 0.033 (normal < or = to 0.022); donor subject is a compound heterozygote: one allele has a T>G transversion at nucleotide 688 in exon 5 of the ALG12 gene [688T>G] resulting in a substitution of aspartic acid for tyrosine at codon 230 [Tyr230Asp(Y230D)] and a second allele has a C>T transition at nucleotide 931 in exon 6 of the ALG12 gene [931C>T] resulting in a substitution of cysteine for arginine at codon 311 [Arg311Cys(R311C)].

Publications

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Eklund EA, Newell JW, Sun L, Seo NS, Alper G, Willert J, Freeze HH, Molecular and clinical description of the first US patients with congenital disorder of glycosylation Ig. Mol Genet Metab84(1):25-31 2005
PubMed ID: 15639192

External Links

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dbSNP dbSNP ID: 17645
Gene Cards ALG12
Gene Ontology GO:0005783 endoplasmic reticulum
GO:0016021 integral to membrane
GO:0016757 transferase activity, transferring glycosyl groups
NCBI Gene Gene ID:79087
NCBI GTR 607143 CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ig; CDG1G
607144 ALG12 ALPHA-1,6-MANNOSYLTRANSFERASE; ALG12
OMIM 607143 CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ig; CDG1G
607144 ALG12 ALPHA-1,6-MANNOSYLTRANSFERASE; ALG12
Omim Description CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Ig

Culture Protocols

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Split Ratio 1:2
Temperature 37 C
Percent CO2 8%
Medium Dulbecco Modified Eagles Medium (high glucose) with 2mM L-glutamine or equivalent
Serum 10% fetal bovine serum Not inactivated
Substrate None specified
Subcultivation Method trypsin-EDTA
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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