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GM18393 Fibroblast

Description:

NIEMANN-PICK DISEASE, TYPE C1; NPC1
NPC1 GENE; NPC1

Affected:

Yes

Sex:

Male

Age:

No Data

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Lysosomal Storage Diseases
Class Disorders of Lipid Metabolism
Cell Type Fibroblast
Transformant Untransformed
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected; fibroblasts showed 103 pmol CE/mg protein/6 hr activity in a cholesterol esterification assay [normal mean was 1855 +/- 1327 pmol CE/mg protein/6 hr, see Park et al. Hum Mut 22:313-325 (2003)]; fibroblasts were scored as npc-like in a filipin staining assay (see Park et al., 2003); a complementation test showed that the cells were type 1 (see Park et al., 2003); the donor subject is a compound heterozygote at the NPC1 gene locus: allele 1 carries a substitution (G>T) at nucleotide 743 (c.743G>T) in exon 6, resulting in a missense mutation at codon 248 [G248V (GLY248VAL)]; allele 2 carries a substitution (T>C) at nucleotide 3425 (c.3425T>C) in exon 22, resulting in a missense mutation at codon 1142 [M1142T (MET1142THR)]; the subject also carries the following polymorphisms: homozygous substitution (A>G) at nucleotide 644 (644A>G) resulting in a missense mutation (H>R) at codon 215 [H215R (HIS215ARG)], homozygous substitution (A>G) at nucleotide 2572 (2572A>G) resulting in a missense mutation (I>V) at codon 858 [I858V (ILE858VAL)], IVS12+8(G)9-14; the first nucleotide of the initiating MET codon is numbered +1.

Characterizations

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Passage Frozen 16
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase,Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis
 
Gene NPC1
Chromosomal Location 18q11-q12
Allelic Variant 1 G248V; NIEMANN-PICK DISEASE, TYPE C1
Identified Mutation GLY248VAL
 
Gene NPC1
Chromosomal Location 18q11-q12
Allelic Variant 2 M1142T; NIEMANN-PICK DISEASE, TYPE C1
Identified Mutation MET1142THR

Phenotypic Data

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Remarks Clinically affected; fibroblasts showed 103 pmol CE/mg protein/6 hr activity in a cholesterol esterification assay [normal mean was 1855 +/- 1327 pmol CE/mg protein/6 hr, see Park et al. Hum Mut 22:313-325 (2003)]; fibroblasts were scored as npc-like in a filipin staining assay (see Park et al., 2003); a complementation test showed that the cells were type 1 (see Park et al., 2003); the donor subject is a compound heterozygote at the NPC1 gene locus: allele 1 carries a substitution (G>T) at nucleotide 743 (c.743G>T) in exon 6, resulting in a missense mutation at codon 248 [G248V (GLY248VAL)]; allele 2 carries a substitution (T>C) at nucleotide 3425 (c.3425T>C) in exon 22, resulting in a missense mutation at codon 1142 [M1142T (MET1142THR)]; the subject also carries the following polymorphisms: homozygous substitution (A>G) at nucleotide 644 (644A>G) resulting in a missense mutation (H>R) at codon 215 [H215R (HIS215ARG)], homozygous substitution (A>G) at nucleotide 2572 (2572A>G) resulting in a missense mutation (I>V) at codon 858 [I858V (ILE858VAL)], IVS12+8(G)9-14; the first nucleotide of the initiating MET codon is numbered +1.

Publications

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Zareba J, Cattaneo EF, Villani A, Othman A, Streb S, Peri F, NPC1 links cholesterol trafficking to microglial morphology via the gastrosome Nature communications15:8638 2024
PubMed ID: 39366931
 
Furtado D, Cortez-Jugo C, Hung YH, Bush AI, Caruso F, mRNA Treatment Rescues Niemann-Pick Disease Type C1 in Patient Fibroblasts Molecular pharmaceutics19:3987-3999 2022
PubMed ID: 36125338

External Links

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dbSNP dbSNP ID: 19429
Gene Cards NPC1
Gene Ontology GO:0004888 transmembrane receptor activity
GO:0005478 intracellular transporter activity
GO:0005624 membrane fraction
GO:0005764 lysosome
GO:0006886 intracellular protein transport
GO:0008158 hedgehog receptor activity
GO:0015248 sterol transporter activity
GO:0016021 integral to membrane
GO:0030301 cholesterol transport
NCBI Gene Gene ID:4864
NCBI GTR 257220 NIEMANN-PICK DISEASE, TYPE C1; NPC1
607623 NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1; NPC1
OMIM 257220 NIEMANN-PICK DISEASE, TYPE C1; NPC1
607623 NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1; NPC1
Omim Description NIEMANN-PICK DISEASE WITH CHOLESTEROL ESTERIFICATION BLOCK
  NIEMANN-PICK DISEASE, CHRONIC NEURONOPATHIC FORM
  NIEMANN-PICK DISEASE, SUBACUTE JUVENILE FORM
  NIEMANN-PICK DISEASE, TYPE C; NPC
  NIEMANN-PICK DISEASE, TYPE C1; NPC1

Culture Protocols

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Passage Frozen 16
Split Ratio 1:4
Temperature 37 C
Percent CO2 5%
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Substrate None specified
Subcultivation Method trypsin-EDTA
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