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GM08771 Fibroblast

Description:

REFSUM DISEASE, INFANTILE FORM
PEROXISOME BIOGENESIS FACTOR 26; PEX26

Affected:

Yes

Sex:

Female

Age:

4 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Disorders of Lipid Metabolism
Cell Type Fibroblast
Transformant Untransformed
Race White
Relation to Proband proband
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks Complementation group 8; severe developmental delay; facial dysmorphism; sensorineural hearing loss; severe visual impairment with retinitis pigmentosa; elevated serum phytanic and pipecolic acid; deficient fibroblast phytanic acid oxidase activity; increased ratio of C26/C22 very long chain fatty acids; donor subject is a compound heterozygote: allele one has a T>C transition at nucleotide 2 of the PEX26 gene (2T>C), resulting in a Met1-to-Thr substitution in the initiator Met residue [Met1Thr (M1T)]; the second allele has a T>C transition at nucleotide 134 (134T>C), resulting in a Leu45-to-Pro substitution [Leu45Pro (L45P)]

Characterizations

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Passage Frozen 14
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis
 
phytanoyl-CoA dioxygenase According to the submitter, biochemical test results for this subject showed decreased enzyme activity. EC Number: 1.14.11.18
 
Gene PEX26
Chromosomal Location 22q11.21
Allelic Variant 1 608666.0005; REFSUM DISEASE, INFANTILE FORM
Identified Mutation MET1THR; In a patient with infantile Refsum disease (266510), Matsumoto et al.[Am. J. Hum. Genet. 73:233-246 (2003)] identified compound heterozygosity for 2 mutations in the PEX26 gene: a 2T-C transition, resulting in a met1-to-thr (M1T) substitution in the initiator met residue, and a 134T-C transition, resulting in a leu45-to-pro (L45P; 608666.0006) substitution. Functional expression studies showed that the M1T mutation allowed some catalase and thiolase import, whereas the L45P mutation had virtually no temperature-sensitive (30 degrees C) import. Coexpression of the 2 mutations resulted in temperature-sensitive import, corresponding to the milder phenotype.
 
Gene PEX26
Chromosomal Location 22q11.21
Allelic Variant 2 608666.0006; REFSUM DISEASE, INFANTILE FORM
Identified Mutation LEU45PRO; In a patient with infantile Refsum disease (266510), Matsumoto et al. [Am. J. Hum. Genet. 73: 233-246 (2003)] identified compound heterozygosity for 2 mutations in the PEX26 gene: a 2T-C transition, resulting in a met1-to-thr (M1T) substitution in the initiator met residue, and a 134T-C transition, resulting in a leu45-to-pro (L45P; 608666.0006) substitution. Functional expression studies showed that the M1T mutation allowed some catalase and thiolase import, whereas the L45P mutation had virtually no temperature-sensitive (30 degrees C) import. Coexpression of the 2 mutations resulted in temperature-sensitive import, corresponding to the milder phenotype.

Phenotypic Data

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Remarks Complementation group 8; severe developmental delay; facial dysmorphism; sensorineural hearing loss; severe visual impairment with retinitis pigmentosa; elevated serum phytanic and pipecolic acid; deficient fibroblast phytanic acid oxidase activity; increased ratio of C26/C22 very long chain fatty acids; donor subject is a compound heterozygote: allele one has a T>C transition at nucleotide 2 of the PEX26 gene (2T>C), resulting in a Met1-to-Thr substitution in the initiator Met residue [Met1Thr (M1T)]; the second allele has a T>C transition at nucleotide 134 (134T>C), resulting in a Leu45-to-Pro substitution [Leu45Pro (L45P)]

Publications

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Weller S, Cajigas I, Morrell J, Obie C, Steel G, Gould SJ, Valle D, Alternative Splicing Suggests Extended Function of PEX26 in Peroxisome Biogenesis. Am J Hum Genet76(6):987-1007 2005
PubMed ID: 15858711
 
Matsumoto N, Tamura S, Furuki S, Miyata N, Moser A, Shimozawa N, Moser HW, Suzuki Y, Kondo N, Fujiki Y, Mutations in novel peroxin gene PEX26 that cause peroxisome-biogenesis disorders of complementation group 8 provide a genotype-phenotype correlation. Am J Hum Genet73(2):233-46 2003
PubMed ID: 12851857
 
Imamura A, Tsukamoto T, Shimozawa N, Suzuki Y, Zhang Z, Imanaka T, Fujiki Y, Orii T, Kondo N, Osumi T, Temperature-sensitive phenotypes of peroxisome-assembly processes represent the milder forms of human peroxisome-biogenesis disorders American journal of human genetics62:1539-43 1998
PubMed ID: 9585609
 
Yajima S, Suzuki Y, Shimozawa N, Yamaguchi S, Orii T, Fujiki Y, Osumi T, Hashimoto T, Moser HW, Complementation study of peroxisome-deficient disorders by immunofluorescence staining and characterization of fused cells. Hum Genet88:491-9 1992
PubMed ID: 1372585
 
Budden SS, Kennaway NG, Buist NR, Poulos A, Weleber RG, Dysmorphic syndrome with phytanic acid oxidase deficiency, abnormal very long chain fatty acids, and pipecolic acidemia: studies in four children. J Pediatr108:33-9 1986
PubMed ID: 2418187
 
Weleber RG, Tongue AC, Kennaway NG, Budden SS, Buist NR, Ophthalmic manifestations of infantile phytanic acid storage disease. Arch Ophthalmol102:1317-21 1984
PubMed ID: 6206835

External Links

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dbSNP dbSNP ID: 15432
Gene Cards PEX26
Gene Ontology GO:0005777 peroxisome
GO:0015031 protein transport
GO:0016021 integral to membrane
NCBI Gene Gene ID:55670
NCBI GTR 266510 PEROXISOME BIOGENESIS DISORDER 3B; PBD3B
608666 PEROXISOME BIOGENESIS FACTOR 26; PEX26
OMIM 266510 PEROXISOME BIOGENESIS DISORDER 3B; PBD3B
608666 PEROXISOME BIOGENESIS FACTOR 26; PEX26
Omim Description INFANTILE PHYTANIC ACID STORAGE DISEASE
  IRD
  REFSUM DISEASE, INFANTILE FORM

Culture Protocols

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Passage Frozen 14
Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Percent O2 3%
Medium Eagles Minimum Essential Medium with Earle's salts:Dulbecco's modified MEM with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Substrate None specified
Subcultivation Method trypsin-EDTA
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