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GM06149 Fibroblast

Description:

TUBEROUS SCLEROSIS 1; TSC1
TSC1 GENE; TSC1

Affected:

Yes

Sex:

Male

Age:

17 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Hereditary Cancers
Cell Type Fibroblast
Transformant Untransformed
Race White
Family Member 1
Relation to Proband proband
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks Same subject as GM06146 (lymphocyte) and GM28959 (iPSC); clinically affected; seizures; hypopigmented macules on right shoulder, right thigh, left chest, right knee, lower back and right upper arm; café-au-lait spot on right wrist; confetti hypopigmentation over back and legs; myopia; at age 17 there were no shagreen patches, ungual fibromas or adenoma sebaceum; calcifications in brain; donor subject is heterozygous for G>A transition at nucleotide 2249 in exon 18 of the TSC1 gene [2249G>A] resulting in a substitution of a termination signal for tryptophan at codon 750 [Trp750Ter (W750X)]; polymorphisms in the TSC1 gene include 2829C>T; polymorphisms in the TSC2 gene include 479-3C>T, 5161-10A>C, 5202T>C, 5259+72C>T; affected father is GM06148 (Fibroblast) and affected brother is GM06150 (Fibroblast).

Characterizations

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PDL at Freeze 4.6
Passage Frozen 4
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by LINE assay
 
Gene TSC1
Chromosomal Location 9q34
Allelic Variant 1 W750X; TUBEROUS SCLEROSIS, TYPE I
Identified Mutation TRP750TER

Phenotypic Data

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Remarks Same subject as GM06146 (lymphocyte) and GM28959 (iPSC); clinically affected; seizures; hypopigmented macules on right shoulder, right thigh, left chest, right knee, lower back and right upper arm; café-au-lait spot on right wrist; confetti hypopigmentation over back and legs; myopia; at age 17 there were no shagreen patches, ungual fibromas or adenoma sebaceum; calcifications in brain; donor subject is heterozygous for G>A transition at nucleotide 2249 in exon 18 of the TSC1 gene [2249G>A] resulting in a substitution of a termination signal for tryptophan at codon 750 [Trp750Ter (W750X)]; polymorphisms in the TSC1 gene include 2829C>T; polymorphisms in the TSC2 gene include 479-3C>T, 5161-10A>C, 5202T>C, 5259+72C>T; affected father is GM06148 (Fibroblast) and affected brother is GM06150 (Fibroblast).

Publications

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Dooves S, van Velthoven AJH, Suciati LG, Heine VM, Neuron-Glia Interactions in Tuberous Sclerosis Complex Affect the Synaptic Balance in 2D and Organoid Cultures Cells10: 2020
PubMed ID: 33445520
 
Warren EC, Dooves S, Lugarà E, Damstra-Oddy J, Schaf J, Heine VM, Walker MC, Williams RSB, Decanoic acid inhibits mTORC1 activity independent of glucose and insulin signaling Proceedings of the National Academy of Sciences of the United States of America10: 2020
PubMed ID: 32879008
 
G Nadadhur A, Alsaqati M, Gasparotto L, Cornelissen-Steijger P, van Hugte E, Dooves S, Harwood AJ, Heine VM, Neuron-Glia Interactions Increase Neuronal Phenotypes in Tuberous Sclerosis Complex Patient iPSC-Derived Models Stem Cell Reports10: 2018
PubMed ID: 30581017
 
Norambuena A, Wallrabe H, Cao R, Wang DB, Silva A, Svindrych Z, Periasamy A, Hu S, Tanzi RE, Kim DY, Bloom GS, A novel lysosome-to-mitochondria signaling pathway disrupted by amyloid-ß oligomers The EMBO journal37: 2018
PubMed ID: 30348864
 
Au KS, Williams AT, Roach ES, Batchelor L, Sparagana SP, Delgado MR, Wheless JW, Baumgartner JE, Roa BB, Wilson CM, Smith-Knuppel TK, Cheung MY, Whittemore VH, King TM, Northrup H, Genotype/phenotype correlation in 325 individuals referred for a diagnosis of tuberous sclerosis complex in the United States Genetics in medicine : official journal of the American College of Medical Genetics9:88-100 2007
PubMed ID: 17304050

External Links

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dbSNP dbSNP ID: 14513
Gene Cards TSC1
Gene Ontology GO:0007155 cell adhesion
GO:0007266 Rho protein signal transduction
GO:0045786 negative regulation of cell cycle
NCBI Gene Gene ID:7248
NCBI GTR 191100 TUBEROUS SCLEROSIS 1; TSC1
605284 TSC COMPLEX SUBUNIT 1; TSC1
OMIM 191100 TUBEROUS SCLEROSIS 1; TSC1
605284 TSC COMPLEX SUBUNIT 1; TSC1
Omim Description EPILOIAADENOMA SEBACEUM, INCLUDED
  HAMARTIN, INCLUDED
  TS
  TUBEROSE SCLEROSIS; TSC
  TUBEROUS SCLEROSIS 1; TSC1

Culture Protocols

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Passage Frozen 4
Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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