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GM04994 Fibroblast

Description:

PSEUDOXANTHOMA ELASTICUM, AUTOSOMAL RECESSIVE; PXE
ATP-BINDING CASSETTE, SUBFAMILY C, MEMBER 6; ABCC6

Affected:

Yes

Sex:

Male

Age:

60 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Ophthalmologic Disorders
Cell Type Fibroblast
Transformant Untransformed
Race White
Relation to Proband proband
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks Clinically affected; similarly affected sib; involvement includes eyes, skin, & gastrointestinal tract; neither parent showed signs of PXE; donor subject is a compound heterozygote: allele 1 carries a C>T transition at nucleotide 3421 (3421C>T) in exon 24 of the ABCC6 gene resulting in an Arg to Ter substitution at codon 1141 [Arg1141Ter (R1141X)]; allele 2 carries a C>T transition at nucleotide 3490 (3490C>T) in exon 24 resulting in an Arg to Ter substitution at codon 1164 [Arg1164Ter (R1164X)].

Characterizations

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PDL at Freeze 4.7
Passage Frozen 9
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase Isoenzyme Electrophoresis
 
Gene ABCC6
Chromosomal Location 16p13.1
Allelic Variant 1 603234.0001; PSEUDOXANTHOMA ELASTICUM, AUTOSOMAL RECESSIVE
Identified Mutation ARG1141TER; In a large consanguineous Italian family segregating autosomal recessive pseudoxanthoma elasticum (264800), Le Saux et al. [Nature Genet. 25: 223-227 (2000)] identified a C-to-T transition at nucleotide 3421 in exon 24 of the ABCC6 gene, resulting in an arg-to-ter substitution at codon 1141 (R1141X).
 
Gene ABCC6
Chromosomal Location 16p13.1
Allelic Variant 2 603234.0013; PSEUDOXANTHOMA ELASTICUM, AUTOSOMAL RECESSIVE
Identified Mutation ARG1164TER; Ringpfeil et al. [Am. J. Hum. Genet. 68: 642-652 (2001)] studied 4 multiplex families with PXE (264800) inherited in an autosomal recessive pattern. In each family, the proband was a compound heterozygote for a single-bp substitution mutation (3490C-T; arg1164 to ter) and a novel deletion of approximately 16.5 kb spanning the site of the single-bp substitution in trans (i.e., on the homologous chromosome 16) (603234.0014).

Phenotypic Data

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Remarks Clinically affected; similarly affected sib; involvement includes eyes, skin, & gastrointestinal tract; neither parent showed signs of PXE; donor subject is a compound heterozygote: allele 1 carries a C>T transition at nucleotide 3421 (3421C>T) in exon 24 of the ABCC6 gene resulting in an Arg to Ter substitution at codon 1141 [Arg1141Ter (R1141X)]; allele 2 carries a C>T transition at nucleotide 3490 (3490C>T) in exon 24 resulting in an Arg to Ter substitution at codon 1164 [Arg1164Ter (R1164X)].

Publications

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Cunningham JR, Lippman SM, Renie WA, Francomano CA, Maumenee IH, Pyeritz RE, Pseudoxanthoma elasticum: treatment of gastrointestinal hemorrhage by arterial embolization and observations on autosomal dominant inheritance. Johns Hopkins Med J147:168-73 1980
PubMed ID: 6968373

External Links

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dbSNP dbSNP ID: 10777
Gene Cards ABCC6
Gene Ontology GO:0000166 nucleotide binding
GO:0005215 transporter activity
GO:0005524 ATP binding
GO:0005886 plasma membrane
GO:0006810 transport
GO:0007601 visual perception
GO:0016021 integral to membrane
GO:0042493 response to drug
GO:0042626 ATPase activity, coupled to transmembrane movement of substances
NCBI Gene Gene ID:368
Gene ID:5823
NCBI GTR 264800 PSEUDOXANTHOMA ELASTICUM; PXE
603234 ATP-BINDING CASSETTE, SUBFAMILY C, MEMBER 6; ABCC6
OMIM 264800 PSEUDOXANTHOMA ELASTICUM; PXE
603234 ATP-BINDING CASSETTE, SUBFAMILY C, MEMBER 6; ABCC6
Omim Description PSEUDOXANTHOMA ELASTICUM, AUTOSOMAL RECESSIVE; PXE

Culture Protocols

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Passage Frozen 9
Split Ratio 1:2
Temperature 37 C
Percent CO2 5%
Percent O2 3%
Medium Eagles Minimum Essential Medium with Earle's salts:Dulbecco's modified MEM with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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