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GM02213 LCL from B-Lymphocyte

Description:

PORPHYRIA, ACUTE INTERMITTENT
HYDROXYMETHYLBILANE SYNTHASE; HMBS

Affected:

Yes

Sex:

Female

Age:

62 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Other Disorders of Known Biochemistry
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Relation to Proband proband
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks Deficient uroporphyrinogen-I synthetase; active AIP; donor subject is heterozygous for a C>T transition at nucleotide 499 in exon 10 of the HMBS gene (499C>T) resulting in the substitution of tryptophan for arginine at codon 167 [Arg167Trp (R167W)]

Characterizations

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hydroxymethylbilane synthase According to the submitter, biochemical test results for this subject showed decreased enzyme activity. EC Number: 2.5.1.61
 
Gene HMBS
Chromosomal Location 11q23.3
Allelic Variant 1 609806.0013; PORPHYRIA, ACUTE INTERMITTENT
Identified Mutation ARG167TRP; In a brother and sister with severe AIP, Llewellyn et al. (1992) identified compound heterozygosity for adjacent base transitions in the PBGD gene. One of the mutations was the arg167-to-gln mutation (176000.0005) due to a G-to-A transition in nucleotide 500. The other mutation, not previously described, was a C-to-T transition in nucleotide 499 resulting in substitution of tryptophan for arginine. The seemingly high frequency of mutations in exon 10 (Delfau et al., 1990) prompted Gu et al. (1992) to screen this exon in 41 unrelated AIP patients by use of denaturing gradient gel electrophoresis (DGGE) after PCR amplification. In about one-fourth of the patients, they distinguished 3 abnormal migration patterns, indicating the presence of mutation in heterozygous state. Sequencing demonstrated the presence of 3 different single-base substitutions, 2 of which had already been described (Delfau et al., 1990). A third one consisted of a C-to-T transition located at position 499 of the PBGD mRNA which resulted in an arg-to-trp substitution at codon 167. All 3 mutations occurred in patients with crossreacting immunologic material, i.e., the CRIM-positive form of AIP. In Finland, Kauppinen et al. (1992) found the arg167-to-trp mutation in 3 out of 7 families with CRIM-positive AIP. All 3 had type 2 CRIM-positive AIP. DNA analyses of family members demonstrated that conventional assays of erythrocyte PBGD activity identified correctly only 72% of the carriers of the mutation.

Phenotypic Data

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Remarks Deficient uroporphyrinogen-I synthetase; active AIP; donor subject is heterozygous for a C>T transition at nucleotide 499 in exon 10 of the HMBS gene (499C>T) resulting in the substitution of tryptophan for arginine at codon 167 [Arg167Trp (R167W)]

External Links

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dbSNP dbSNP ID: 16020
Gene Cards HMBS
Gene Ontology GO:0004418 hydroxymethylbilane synthase activity
GO:0006783 heme biosynthesis
GO:0016740 transferase activity
NCBI Gene Gene ID:3145
NCBI GTR 176000 PORPHYRIA, ACUTE INTERMITTENT; AIP
609806 HYDROXYMETHYLBILANE SYNTHASE; HMBS
OMIM 176000 PORPHYRIA, ACUTE INTERMITTENT; AIP
609806 HYDROXYMETHYLBILANE SYNTHASE; HMBS
Omim Description AIP
  PBGD DEFICIENCY
  PORPHOBILINOGEN DEAMINASE DEFICIENCY
  PORPHYRIA, ACUTE INTERMITTENT
  PORPHYRIA, SWEDISH TYPE
  UPS DEFICIENCYHYDROXYMETHYLBILANE SYNTHASE, INCLUDED; HMBS, INCLUDED
  UROPORPHYRINOGEN SYNTHASE DEFICIENCY

Culture Protocols

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Split Ratio 1:4
Temperature 37 C
Percent CO2 5%
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 20% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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