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GM01655 LCL from B-Lymphocyte

Description:

MAPLE SYRUP URINE DISEASE (MSUD), TYPE IA
BRANCHED-CHAIN KETO ACID DEHYDROGENASE E1, ALPHA POLYPEPTIDE; BCKDHA

Affected:

Yes

Sex:

Female

Age:

5 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Disorders of Amino Acid Metabolism
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Family Member 1
Relation to Proband proband
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks See GM01654 Fibro; HLA type A1,A2,B13, Bw17(B23)(Bw40); Mennonite kindred; 2 sisters died of MSUD; deficient BCKD (BCKAD) activity in fibro and lympho; expired at age 5; deficient of BCKD (BCKAD) complex subunit E1B; homozygous for Y438N mutation (formerly designated Y393N) in the BCKDHA gene

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase Isoenzyme Electrophoresis
 
3-methyl-2-oxobutanoate dehydrogenase Indo et al (J Clin Invest 80:63-70 1987) reported that lymphoblasts from this patient had BCKDH enzyme activity which showed sigmoidal or near sigmoidal kinetics for overall activity which was reduced from normal activity. Both fibroblasts and lymphoblasts showed a markedly decreased amount of the E1B (branched-chain alpha-keto acid decarboxylase) protein component of the BCKDH complex using an immunoblot analysis. The E1A subunit gave a weakly positive reaction and the E2 (dihydrolipoyl transacylase) and E3 (dihydrolipoyl dehydrogenase) proteins exhibited cross-reactive peptide. Fisher et al (Am J Hum Genet 49:429-434 1991) reported that cDNA from this maple syrup urine disease patient showed a mutation at codon 393 of the mature E1 alpha polypeptide consisting of a base substitution changing a tyrosine (encoded by TAC) to an asparagine residue (encoded by AAC) which is designated Y393N. The patient was found to be homozygous for the mutation. EC Number: 1.2.4.4
 
GENE MAPPING & DOSAGE STUDIES - Y CHROMOSOME PCR analysis of DNA from this cell culture gave a negative result with a primer for Yq11, DYS227.
 
Gene BCKDHA
Chromosomal Location 19q13.1-q13.2
Allelic Variant 1 Y438N; MAPLE SYRUP URINE DISEASE, CLASSIC TYPE IA, DUE TO DEFICIENCY OF E1A
Identified Mutation TYR438ASN (FORMERLY TYR393ASN)
 
Gene BCKDHA
Chromosomal Location 19q13.1-q13.2
Allelic Variant 2 Y438N; MAPLE SYRUP URINE DISEASE, CLASSIC TYPE IA, DUE TO DEFICIENCY OF E1A
Identified Mutation TYR438ASN (FORMERLY TYR393ASN)

Phenotypic Data

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Remarks See GM01654 Fibro; HLA type A1,A2,B13, Bw17(B23)(Bw40); Mennonite kindred; 2 sisters died of MSUD; deficient BCKD (BCKAD) activity in fibro and lympho; expired at age 5; deficient of BCKD (BCKAD) complex subunit E1B; homozygous for Y438N mutation (formerly designated Y393N) in the BCKDHA gene

Publications

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Fisher CR, Fisher CW, Chuang DT, Cox RP, Occurrence of a Tyr393----Asn (Y393N) mutation in the E1 alpha gene of the branched-chain alpha-keto acid dehydrogenase complex in maple syrup urine disease patients from a Mennonite population. Am J Hum Genet49:429-34 1991
PubMed ID: 1867199
 
Matsuda I, Nobukuni Y, Mitsubuchi H, Indo Y, Endo F, Asaka J, Harada A, A T-to-A substitution in the E1 alpha subunit gene of the branched- chain alpha-ketoacid dehydrogenase complex in two cell lines derived from Menonite maple syrup urine disease patients. Biochem Biophys Res Commun172:646-51 1990
PubMed ID: 2241958
 
Indo Y, Kitano A, Endo F, Akaboshi I, Matsuda I, Altered kinetic properties of the branched-chain alpha-keto acid dehydrogenase complex due to mutation of the beta-subunit of the branched-chain alpha-keto acid decarboxylase (E1) component in lymphoblastoid cells derived from patients with maple syrup urine disease. J Clin Invest80:63-70 1987
PubMed ID: 3597778

External Links

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dbSNP dbSNP ID: 10429
Gene Cards BCKDHA
Gene Ontology GO:0003826 alpha-ketoacid dehydrogenase activity
GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
GO:0005739 mitochondrion
GO:0005947 alpha-ketoglutarate dehydrogenase complex (sensu Eukarya)
GO:0008152 metabolism
NCBI Gene Gene ID:593
NCBI GTR 248600 MAPLE SYRUP URINE DISEASE; MSUD
608348 BRANCHED-CHAIN KETO ACID DEHYDROGENASE E1, ALPHA POLYPEPTIDE; BCKDHA
OMIM 248600 MAPLE SYRUP URINE DISEASE; MSUD
608348 BRANCHED-CHAIN KETO ACID DEHYDROGENASE E1, ALPHA POLYPEPTIDE; BCKDHA
Omim Description BCKD DEFICIENCY
  BCKD, E1-ALPHA SUBUNIT, INCLUDED; BCKDE1A, INCLUDED
  BRANCHED-CHAIN ALPHA-KETO ACID DEHYDROGENASE DEFICIENCY
  BRANCHED-CHAIN KETO ACID DEHYDROGENASE E1, ALPHA POLYPEPTIDE, INCLUDED;BCKDHA, INCLUDED; BCKDH, INCLUDED
  BRANCHED-CHAIN KETOACIDURIA
  KETO ACID DECARBOXYLASE DEFICIENCYTHIAMINE-RESPONSIVE MSUD, INCLUDED
  MAPLE SYRUP URINE DISEASE, TYPE IA
  MSUD
  MSUD, TYPE IA

Culture Protocols

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Split Ratio 1:4
Temperature 37 C
Percent CO2 5%
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 20% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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