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GM01098 Fibroblast

Description:

COCKAYNE SYNDROME, TYPE B; CSB
EXCISION-REPAIR CROSS-COMPLEMENTING, GROUP 6; ERCC6

Affected:

Yes

Sex:

Male

Age:

20 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Disorders of Connective Tissue, Muscle, and Bone
Class Repair Defective and Chromosomal Instability Syndromes
Cell Type Fibroblast
Transformant Untransformed
Race White
Family Member 1
Relation to Proband proband
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks Clinically affected; subject alternate ID is CS2BE or CS5HO; complementation group B; 46,XY; sensitive to UV irradiation; pigmentary retinopathy symptoms; gait defect; donor subject is a compound heterozygote: one allele has a 1 bp deletion at nucleotide 3614 in exon 18 of the ERCC6 gene (3614delT) causing a frameshift beginning at codon 1179 and ending with a stop codon at 1200 (1179fsX1200); the second allele has a deletion of exon 10 (del665_723); see GM01712 Lymphoid;

Characterizations

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PDL at Freeze 6.28
Passage Frozen 10
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis and by Chromosome Analysis
 
Gene ERCC6
Chromosomal Location 10q11
Allelic Variant 1 1179fsX1200; COCKAYNE SYNDROME, TYPE B
Identified Mutation 3614delT
 
Gene ERCC6
Chromosomal Location 10q11
Allelic Variant 2 deleted exon 10; COCKAYNE SYNDROME, TYPE B
Identified Mutation DEL EX10

Phenotypic Data

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Remarks Clinically affected; subject alternate ID is CS2BE or CS5HO; complementation group B; 46,XY; sensitive to UV irradiation; pigmentary retinopathy symptoms; gait defect; donor subject is a compound heterozygote: one allele has a 1 bp deletion at nucleotide 3614 in exon 18 of the ERCC6 gene (3614delT) causing a frameshift beginning at codon 1179 and ending with a stop codon at 1200 (1179fsX1200); the second allele has a deletion of exon 10 (del665_723); see GM01712 Lymphoid;

Publications

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Fishel ML, Gamcsik MP, Delaney SM, Zuhowski EG, Maher VM, Karrison T, Moschel RC, Egorin MJ, Dolan ME, Role of glutathione and nucleotide excision repair in modulation of cisplatin activity with O6-benzylguanine Cancer chemotherapy and pharmacology55:333-42 2004
PubMed ID: 15723259
 
Tuo J, Jaruga P, Rodriguez H, Bohr VA, Dizdaroglu M, Primary fibroblasts of Cockayne syndrome patients are defective in cellular repair of 8-hydroxyguanine and 8-hydroxyadenine resulting from oxidative stress. FASEB J17(6):668-74 2003
PubMed ID: 12665480
 
Cleaver JE, Thompson LH, Richardson AS, States JC, A summary of mutations in the UV-sensitive disorders: xeroderma pigmentosum, Cockayne syndrome, and trichothiodystrophy. Hum Mutat14(1):9-22 1999
PubMed ID: 10447254
 
Mallery DL, Tanganelli B, Colella S, Steingrimsdottir H, van Gool AJ, Troelstra C, Stefanini M, Lehmann AR, Molecular analysis of mutations in the CSB (ERCC6) gene in patients with Cockayne syndrome. Am J Hum Genet62(1):77-85 1998
PubMed ID: 9443879
 
Abramova NA, Russell J, Botchan M, Li R, Interaction between replication protein A and p53 is disrupted after UV damage in a DNA repair-dependent manner. Proc Natl Acad Sci U S A94:7186-91 1997
PubMed ID: 9207066
 
Balajee AS, May A, Dianov GL, Friedberg EC, Bohr VA, Reduced RNA polymerase II transcription in intact and permeabilized Cockayne syndrome group B cells. Proc Natl Acad Sci U S A94(9):4306-11 1997
PubMed ID: 9113985
 
Tu Y, Bates S, Pfeifer GP, Sequence-specific and domain-specific DNA repair in xeroderma pigmentosum and Cockayne syndrome cells. J Biol Chem272:20747-55 1997
PubMed ID: 9252397
 
Bregman DB, Halaban R, van Gool AJ, Henning KA, Friedberg EC, Warren SL, UV-induced ubiquitination of RNA polymerase II: a novel modification deficient in Cockayne syndrome cells. Proc Natl Acad Sci U S A93:11586-90 1996
PubMed ID: 8876179
 
Wang G, Seidman MM, Glazer PM, Mutagenesis in mammalian cells induced by triple helix formation and transcription-coupled repair. Science271(5250):802-5 1996
PubMed ID: 8628995
 
Kantor GJ, Bastin SA, Repair of some active genes in Cockayne syndrome cells is at the genome overall rate. Mutat Res336(3):223-33 1995
PubMed ID: 7739610
 
Jaeken J, Klocker H, Schwaiger H, Bellmann R, Hirsch-Kauffmann M, Schweiger M, Clinical and biochemical studies in three patients with severe early infantile Cockayne syndrome. Hum Genet83:339-46 1989
PubMed ID: 2478446
 
Hurt MM, Moses RE, Conversion of replicative intermediates in human DNA-repair defective cells. Exp Cell Res163:396-404 1986
PubMed ID: 3956584
 
Coohill TP, Moore SP, Grider RA, Action spectra (254-302 nm) for four human photosensitive cell lines. Photochem Photobiol38:105-7 1983
PubMed ID: 6622549
 
Lehmann AR, Three complementation groups in Cockayne syndrome. Mutat Res106:347-56 1982
PubMed ID: 6185841
 
Arlett CF, Harcourt SA, Survey of radiosensitivity in a variety of human cell strains. Cancer Res40:926-32 1980
PubMed ID: 7471106
 
Andrews AD, Barrett SF, Yoder FW, Robbins JH, Cockayne's syndrome fibroblasts have increased sensitivity to ultraviolet light but normal rates of unscheduled DNA synthesis. J Invest Dermatol70:237-9 1978
PubMed ID: 641373
 
Moses RE, Beaudet AL, Apurinic DNA endonuclease activities in repair-deficient human cell lines. Nucleic Acids Res5:463-73 1978
PubMed ID: 634794

External Links

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dbSNP dbSNP ID: 22997
Gene Cards ERCC6
Gene Ontology GO:0003677 DNA binding
GO:0003678 DNA helicase activity
GO:0003702 RNA polymerase II transcription factor activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0005634 nucleus
GO:0006281 DNA repair
GO:0006355 regulation of transcription, DNA-dependent
GO:0006366 transcription from Pol II promoter
GO:0007605 perception of sound
GO:0008026 ATP-dependent helicase activity
NCBI Gene Gene ID:2074
NCBI GTR 133540 COCKAYNE SYNDROME B; CSB
609413 EXCISION REPAIR CROSS-COMPLEMENTING, GROUP 6; ERCC6
OMIM 133540 COCKAYNE SYNDROME B; CSB
609413 EXCISION REPAIR CROSS-COMPLEMENTING, GROUP 6; ERCC6
Omim Description COCKAYNE SYNDROME, TYPE II, INCLUDED
  EXCISION-REPAIR CROSS-COMPLEMENTING RODENT REPAIR DEFICIENCY, COMPLEMENTATIONGROUP 6; ERCC6
  RAD26 (YEAST) HOMOLOGCOCKAYNE SYNDROME, TYPE B, INCLUDED; CSB, INCLUDED

Culture Protocols

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Passage Frozen 10
Split Ratio 1:2
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
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$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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