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GM00144 Fibroblast

Description:

TRISOMY 21
TRANSLOCATED CHROMOSOME

Affected:

Yes

Sex:

Female

Age:

34 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Images
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Chromosome Abnormalities
Class Other Disorders of Known Biochemistry
Cell Type Fibroblast
Transformant Untransformed
Race White
Relation to Proband proband
Confirmation Clinical summary/Case history
ISCN 45,XX,der(6)(6qter>6p25::21q11>21qter),-21[30]/46,XX,der(6)(6qter>6p25::21q11>21qter)[14]/46,XX,der(6)(6qter>6p25::21q11>21qter),der(21)(21pter>q22.3::7q22.3>7qter)[3]/46,XX,der(6)(6qter>6p25::21q11>21qter),add(21)(pter>q22.3:?)[3]
Species Homo sapiens
Common Name Human
Remarks 13% of cells found to be balanced in passage 1 after recovery; these tend to increase with passage in culture; clinical features of Down syndrome; 3 male sibs have balanced translocations

Characterizations

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Passage Frozen 9
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis and by Chromosome Analysis
 
Cytogenetics Chromosome 21: DERIVATIVE CHROMOSOME Aneuploid Segment (-)21pter>21q11
Chromosome 6: DERIVATIVE CHROMOSOME Aneuploid Segment (-)6pter>6p25

Phenotypic Data

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Remarks 13% of cells found to be balanced in passage 1 after recovery; these tend to increase with passage in culture; clinical features of Down syndrome; 3 male sibs have balanced translocations

Publications

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Lafreniere RG, Brown CJ, Powers VE, Carrel L, Davies KE, Barker DF, Willard HF, Physical mapping of 60 DNA markers in the p21.1----q21.3 region of the human X chromosome. Genomics11:352-63 1991
PubMed ID: 1685139
 
Barker PE, Rabin M, Watson M, Breg WR, Ruddle FH, Verma IM, Human c-fos oncogene mapped within chromosomal region 14q21----q31. Proc Natl Acad Sci U S A81:5826-30 1984
PubMed ID: 6091112
 
Lidksy AS, Robson KJ, Thirumalachary C, Barker PE, Ruddle FH, Woo SL, The PKU locus in man is on chromosome 12. Am J Hum Genet36:527-33 1984
PubMed ID: 6547271
 
Maurer BJ, Barker PE, Masters JN, Ruddle FH, Attardi G, Human dihydrofolate reductase gene is located in chromosome 5 and is unlinked to the related pseudogenes. Proc Natl Acad Sci U S A81:1484-8 1984
PubMed ID: 6584893
 
Shulman LM, Barker PE, Hart JT, Messer Peters PG, Ruddle FH, Assignment of low-molecular-weight human (2', 5')A synthetase to chromosome 11. Somat Cell Mol Genet10:247-57 1984
PubMed ID: 6585970
 
Kamarck ME, Macyko CA, Cunningham AC, Ruddle FH, The gene coding the human S11 surface antigens maps between the loci for HPRT and G6PD on the X-chromosome. Exp Cell Res149:325-34 1983
PubMed ID: 6685651
 
Lubiniecki AS, Blattner WA, Martin GM, Fialkow PJ, Dosik H, Eatherly C, Fraumeni JF Jr, SV40 T-antigen expression in cultured fibroblasts from patients with Down syndrome and their parents. Am J Hum Genet31:469-77 1979
PubMed ID: 225951
 
Dorman BP, Shimizu N, Ruddle FH, Genetic analysis of the human cell surface: antigenic marker for the human X chromosome in human-mouse hybrids. Proc Natl Acad Sci U S A75:2363-7 1978
PubMed ID: 353811
 
Tan YH, Greene AE, Subregional localization of the gene(s) governing the human interferon induced antiviral state in man. J Gen Virol32:153-5 1976
PubMed ID: 182912
 
Borgaonkar DS, Greene AE, Coriell LL, A (6;21) translocation, unbalanced, 46 chromosomes. Repository identification no. GM-144. Cytogenet Cell Genet13:403-5 1974
PubMed ID: 4139000
 
Borgaonkar DS, Bias WB, Chase GA, Sadasivan G, Herr HM, Golomb HM, Bahr GF, Kunkel LM, Identification of a C6-G21 translocation chromosome by the Q-M and Giemsa banding techniques in a patient with Down's syndrome, with possible assignment of Gm locus. Clin Genet4:53-7 1973
PubMed ID: 4120631

External Links

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dbSNP dbSNP ID: 22178
GEO GEO Accession No: GSM426280
NCBI Gene Gene ID:1637
NCBI GTR 190685 DOWN SYNDROME
OMIM 190685 DOWN SYNDROME
Omim Description DOWN SYNDROME CRITICAL REGION; DSCR, INCLUDED
  DOWN SYNDROMEDOWN SYNDROME CHROMOSOME REGION; DCR, INCLUDED
  TRISOMY 21

Images

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View karyotype 

Culture Protocols

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Passage Frozen 9
Split Ratio 1:2
Temperature 37 C
Percent CO2 5%
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Substrate None specified
Subcultivation Method trypsin-EDTA
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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