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CD00019 DNA from LCL

Description:

HEMOCHROMATOSIS; HFE

Affected:

No Data

Sex:

Male

Age:

44 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links

Overview

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Repository Centers for Disease Control and Prevention Repository
Class Disorders of Metal Metabolism
Quantity 10ug
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Sample Source DNA from LCL
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Donor subject has one allele which has an A>T transversion at nucleotide 193 in exon 2 of the HFE (HLA-H) gene [193A>T] resulting in a substitution of cysteine for serine at codon 65 [Ser65Cys (S65C)] and a second allele which tested negative for the C282Y, H63D, and S65C mutations

Characterizations

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Gene HFE
Chromosomal Location 6p22.2
Allelic Variant 1 613609.0003; HEMOCHROMATOSIS
Identified Mutation SER65CYS; Mura et al. [Blood 93: 2502-2505 (1999)] reported on the analysis of the cys282-to-tyr (C282Y; 235200.0001), his63-to-asp (H63D; 235200.0002), and ser65-to-cys (S65C) mutations of the HFE gene in a series of 711 probands with hereditary hemochromatosis and 410 controls. The results confirmed that the C282Y substitution is the main mutation involved in HH, accounting for 85% of carrier chromosomes, whereas the H63D substitution represented 39% of the HH chromosomes that did not carry the C282Y mutation. In addition, the screening showed that the S65C substitution, which results from a 193A-T transversion, was significantly enriched in probands with at least one chromosome without an assigned mutation. This substitution accounted for 7.8% of HH chromosomes that were neither C282Y nor H63D. This enrichment of S65C among HH chromosomes suggested that the S65C substitution is associated with a mild form of hemochromatosis.

Phenotypic Data

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Remarks Donor subject has one allele which has an A>T transversion at nucleotide 193 in exon 2 of the HFE (HLA-H) gene [193A>T] resulting in a substitution of cysteine for serine at codon 65 [Ser65Cys (S65C)] and a second allele which tested negative for the C282Y, H63D, and S65C mutations

External Links

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dbSNP dbSNP ID: 20534
Gene Ontology GO:0005737 cytoplasm
GO:0005887 integral to plasma membrane
GO:0006461 protein complex assembly
GO:0006810 transport
GO:0006826 iron ion transport
GO:0006879 iron ion homeostasis
GO:0006898 receptor mediated endocytosis
GO:0006955 immune response
GO:0016020 membrane
GO:0019883 antigen presentation, endogenous antigen
GO:0019885 antigen processing, endogenous antigen via MHC class I
GO:0030106 MHC class I receptor activity
NCBI Gene Gene ID:3077
NCBI GTR 235200 HEMOCHROMATOSIS, TYPE 1; HFE1
OMIM 235200 HEMOCHROMATOSIS, TYPE 1; HFE1
Omim Description HEMOCHROMATOSIS, HEREDITARY; HH
  HEMOCHROMATOSIS; HFE
  HLAH

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Pricing
Commercial:
$225.00USD
Academic &
Non-profit:
$114.00USD
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