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AG10033 LCL from B-Lymphocyte

Description:

XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C; XPC

Affected:

Yes

Sex:

Male

Age:

21 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIA Aging Cell Culture Repository
Subcollection Heritable Diseases
Class Repair Defective and Chromosomal Instability Syndromes
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race American Indian/Alaska Native
Family Member 1
Relation to Proband proband
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks The American Indian donor (XP23BE) is clinically affected with features of sun sensitivity, freckling, over 50 skin cancers, and an astrocytoma of the spinal cord. The donor also has a cystic bone disorder of unknown origin. He has consanguineous parents and a sibling who died of X P. The blood specimen was taken ante-mortem on 5/16/88. The culture was initiated by transformation of lymphocytes with Epstein Barr virus. The cells grow in suspension and their morphology is spherical. A skin fibroblast culture from same donor is AG10032. Donor subject is homozygous for an A>C transversion at -2 in intron 5.1 of the XPC gene (IVS5.1-2A>C) resulting in an 83 bp insertion of intron 5.1 with a stop 34 codons downstream.

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis
 
Gene XPC
Chromosomal Location 3p25
Allelic Variant 1 83 bp ins/stop 34 codons downstream; XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C
Identified Mutation IVS5.1-2A>C
 
Gene XPC
Chromosomal Location 3p25
Allelic Variant 2 83 bp ins/stop 34 codons downstream; XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C
Identified Mutation IVS5.1-2A>C

Phenotypic Data

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Remarks The American Indian donor (XP23BE) is clinically affected with features of sun sensitivity, freckling, over 50 skin cancers, and an astrocytoma of the spinal cord. The donor also has a cystic bone disorder of unknown origin. He has consanguineous parents and a sibling who died of X P. The blood specimen was taken ante-mortem on 5/16/88. The culture was initiated by transformation of lymphocytes with Epstein Barr virus. The cells grow in suspension and their morphology is spherical. A skin fibroblast culture from same donor is AG10032. Donor subject is homozygous for an A>C transversion at -2 in intron 5.1 of the XPC gene (IVS5.1-2A>C) resulting in an 83 bp insertion of intron 5.1 with a stop 34 codons downstream.

External Links

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dbSNP dbSNP ID: 17432
Gene Ontology GO:0003684 damaged DNA binding
GO:0003697 single-stranded DNA binding
GO:0005634 nucleus
GO:0006289 nucleotide-excision repair
NCBI Gene Gene ID:7508
NCBI GTR 278720 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C; XPC
OMIM 278720 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C; XPC
Omim Description XERODERMA PIGMENTOSUM III; XP3
  XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP C; XPC
  XP, GROUP C
  XPCC

Culture Protocols

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Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
Commercial:
$257.00USD
Academic &
Non-profit:
$103.00USD
NIA Grantees:
$47.00USD
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