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AG09952 LCL from B-Lymphocyte

Description:

ALZHEIMER DISEASE; AD
APOLIPOPROTEIN E; APOE
NIA AGING CELL REPOSITORY DNA PANEL - LATE ONSET FAMILIAL ALZHEIMER DISEASE

Affected:

Yes

Sex:

Male

Age:

76 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Images
  • Culture Protocols

Overview

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Repository NIA Aging Cell Culture Repository
Subcollection Alzheimer's Disease
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Ethnicity GERMAN
Family Member 1
Relation to Proband proband
Confirmation Clinical summary/Case history
ISCN 45,X[2]/46,XY[48]
Species Homo sapiens
Common Name Human
Remarks Donor was clinically affected with Alzheimer's disease. Diagnosis was autopsy confirmed. Donor's father, brother, and sister are affected. Culture was initiated on 5/06/87 by transformation of lymphocytes with Epstein Barr virus. The cells grow in suspension and their morphology is spherical. The karyotype is 46,XY; normal diploid male. A fibroblast culture from same donor is AG11368. Donor is Volga German. The Asn141Ile mutation in PS2 not found. The APOE genotype of the donor subject is E4/E4. The legacy karyotype description shown in this Remark may not be representative of the current available product.

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis and by Chromosome Analysis
 
Gene APOE
Chromosomal Location 19q13.2
Allelic Variant 1 107741.0016; APOE4 ISOFORM
Identified Mutation CYS112ARG; Weisgraber et al. [J. Biol. Chem. 256: 9077-9083 (1981)], Das et al. [J. Biol. Chem. 260: 6240-6247 (1985)] and Paik et al. [Proc. Nat. Acad. Sci. 82: 3445-3449 (1985)] identified the apolipoprotein E4 isoform in which there is a Cys112-to-Arg substitution. This variant is found in 6% to 37% of individuals from different populations.
 
Gene APOE
Chromosomal Location 19q13.2
Allelic Variant 2 107741.0016; APOE4 ISOFORM
Identified Mutation CYS112ARG; Weisgraber et al. [J. Biol. Chem. 256: 9077-9083 (1981)], Das et al. [J. Biol. Chem. 260: 6240-6247 (1985)] and Paik et al. [Proc. Nat. Acad. Sci. 82: 3445-3449 (1985)] identified the apolipoprotein E4 isoform in which there is a Cys112-to-Arg substitution. This variant is found in 6% to 37% of individuals from different populations.

Phenotypic Data

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Remarks Donor was clinically affected with Alzheimer's disease. Diagnosis was autopsy confirmed. Donor's father, brother, and sister are affected. Culture was initiated on 5/06/87 by transformation of lymphocytes with Epstein Barr virus. The cells grow in suspension and their morphology is spherical. The karyotype is 46,XY; normal diploid male. A fibroblast culture from same donor is AG11368. Donor is Volga German. The Asn141Ile mutation in PS2 not found. The APOE genotype of the donor subject is E4/E4. The legacy karyotype description shown in this Remark may not be representative of the current available product.

Publications

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Rogaev EI, Sherrington R, Rogaeva EA, Levesque G, Ikeda M, Liang Y, Chi H, Lin C, Holman K, Tsuda T, et al, Familial Alzheimer's disease in kindreds with missense mutations in a gene on chromosome 1 related to the Alzheimer's disease type 3 gene. Nature376:775-8 1995
PubMed ID: 7651536
 
Schellenberg GD, Bird TD, Wijsman EM, Orr HT, Anderson L, Nemens E, White JA, Bonnycastle L, Weber JL, Alonso ME, et al, Genetic linkage evidence for a familial Alzheimer's disease locus on chromosome 14. Science258:668-71 1992
PubMed ID: 1411576
 
Schellenberg GD, Pericak-Vance MA, Wijsman EM, Moore DK, Gaskell PC Jr, Yamaoka LA, Bebout JL, Anderson L, Welsh KA, Clark CM, et al, Linkage analysis of familial Alzheimer disease, using chromosome 21 markers. Am J Hum Genet48:563-83 1991
PubMed ID: 1998342
 
Bird TD, Sumi SM, Nemens EJ, Nochlin D, Schellenberg G, Lampe TH, Sadovnick A, Chui H, Miner GW, Tinklenberg J, Phenotypic heterogeneity in familial Alzheimer's disease: a study of 24 kindreds. Ann Neurol25:12-25 1989
PubMed ID: 2913924
 
Bird TD, Lampe TH, Nemens EJ, Miner GW, Sumi SM, Schellenberg GD, Familial Alzheimer's disease in American descendants of the Volga Germans: probable genetic founder effect. Ann Neurol23:25-31 1988
PubMed ID: 3345066

External Links

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dbSNP dbSNP ID: 10204
Gene Cards APOE
Gene Ontology GO:0000302 response to reactive oxygen species
GO:0001540 beta-amyloid binding
GO:0005319 lipid transporter activity
GO:0005576 extracellular
GO:0005737 cytoplasm
GO:0006869 lipid transport
GO:0006917 induction of apoptosis
GO:0007010 cytoskeleton organization and biogenesis
GO:0007271 synaptic transmission, cholinergic
GO:0007611 learning and/or memory
GO:0008015 circulation
GO:0008201 heparin binding
GO:0008289 lipid binding
GO:0016209 antioxidant activity
GO:0030516 regulation of axon extension
GO:0042157 lipoprotein metabolism
GO:0042632 cholesterol homeostasis
GO:0046907 intracellular transport
GO:0048156 tau protein binding
GO:0048168 regulation of neuronal synaptic plasticity
GO:0050749 apolipoprotein E receptor binding
GO:0050750 low-density lipoprotein receptor binding
NCBI Gene Gene ID:348
NCBI GTR 104300 ALZHEIMER DISEASE; AD
107741 APOLIPOPROTEIN E; APOE
OMIM 104300 ALZHEIMER DISEASE; AD
107741 APOLIPOPROTEIN E; APOE
Omim Description ALZHEIMER DISEASE, FAMILIAL; FAD
  ALZHEIMER DISEASE; AD
  PRESENILE AND SENILE DEMENTIA

Images

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View karyotype 

Culture Protocols

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Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
Commercial:
$257.00USD
Academic &
Non-profit:
$103.00USD
NIA Grantees:
$47.00USD
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